Chromobacterium subtsugae: U6115_02440
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Entry
U6115_02440 CDS
T11179
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03030
DNA replication
csut03430
Mismatch repair
csut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U6115_02440 (holA)
03430 Mismatch repair
U6115_02440 (holA)
03440 Homologous recombination
U6115_02440 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csut03032
]
U6115_02440 (holA)
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_02440 (holA)
Enzymes [BR:
csut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U6115_02440 (holA)
DNA replication proteins [BR:
csut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U6115_02440 (holA)
DNA repair and recombination proteins [BR:
csut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U6115_02440 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
DNA_pol3_gamma3
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WSE92121
LinkDB
All DBs
Position
496133..497137
Genome browser
AA seq
334 aa
AA seq
DB search
MPSLSPDALTAALAKGLAPLYLVHGEEALLALEAADAVRAAARAAGYLEREVLTVEAGFD
WSQLFDAMSSVSLFASLKLLEIRIPGGKPGTEGSEALQRLAANPPADTLTLITLPKLDKT
QQQGKWFAALEKAGLAVEARPVGRAELPGWISRRLKAQGQQLGSEALAFFVERVEGNLLA
ARQEVDKLALLYPKGELSLADLQAAVANVARFDVFQLSESWLAGDAPRLMRMLDGLMAEG
EAPVLVLWSLSEDVRMLLRLRQGLKDGRQLRDMARELRLWGDKQRLAEPALRRIGPRKLM
QALSECARIDRQIKGVEPGEPWQTMRALATLLAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcactcagccctgacgcgttgaccgcggcgctggccaaggggctggcgccgttg
tacctggtgcacggggaagaggcgctgctggcgctggaggccgccgacgccgtgcgcgcg
gcggcgcgcgcggccggttacctggagcgcgaagtgctgacggtggaggcgggtttcgat
tggtcgcagctgttcgacgcgatgagcagcgtgtcgctgttcgcctcgctgaagctgctg
gaaatccgcattcccggcggcaagccgggcaccgagggcagcgaggcgctgcagcggctg
gcggccaacccgccggccgacaccctcaccctgatcacgctgcccaagctggacaagacc
cagcagcagggcaagtggttcgccgcgctggaaaaggccgggctggcggtggaggcgcgc
ccggtgggccgcgccgaactgccgggctggatttcgcggcggctgaaggcgcagggtcag
caactgggcagcgaggcgctggcgttcttcgtcgagcgggtggagggcaacctgctggcc
gcgcgccaggaggtcgacaagctggcgctgctgtatcccaagggcgaactcagcctggcg
gacctgcaggcggcggtggccaatgtcgcccgtttcgacgtgttccagttgtcggaatcc
tggctggccggcgacgcgccgcggctgatgcggatgctggacgggctgatggccgaaggc
gaggcgccggtgctggtgttgtggtcgctgtccgaggacgtgcgcatgctgctcaggctg
cgccagggcctgaaggacggccgccagctgcgcgacatggcgcgcgaactgcggctgtgg
ggcgacaagcagcggctggccgagccggcgctgcgccgcatcggcccgcgcaagctgatg
caggcgttgtccgagtgcgcgcgcatcgatcgccagatcaagggcgtggagccgggcgag
ccctggcagaccatgcgggcgctggcgaccctgctggccgcctga
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