Chromobacterium subtsugae: U6115_05305
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Entry
U6115_05305 CDS
T11179
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
csut Chromobacterium subtsugae
Pathway
csut00470
D-Amino acid metabolism
csut01100
Metabolic pathways
csut01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U6115_05305 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
U6115_05305 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csut01011
]
U6115_05305 (alr)
Enzymes [BR:
csut01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
U6115_05305 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
csut01011
]
Precursor biosynthesis
Racemase
U6115_05305 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
WSE92674
LinkDB
All DBs
Position
complement(1101360..1102433)
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AA seq
357 aa
AA seq
DB search
MTRPIRLEIDLSAIRHNFLFTRQRAQAKRLFAVVKANAYGHGILDTAKALADLADGFALL
NIEDAVALREAGIDRPIALLEGPFDAAEAAAMGEYRLCGAVHSLEQMAWLAKGSAARPAE
VWLKINSGMNRLGFRPEQAGDALARLRAEPAIRPAAIMTHFATADEAYGVDEQWRDFATL
ARDSALPVSAANSAALLRHPHTHGDIGRPGIVLYGASPFEDSTGAALGLRPAMTLSADII
AVQQLRNGDAVGYGRRFVADRDMRIGIVACGYADGYPRIAANGTPVAVDGAASGTVGRVS
MDMLAVDLSHLPQAGVGSRVELWGPQAPIERVAAAAGTISYELMCAVAARVPRSLRA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacacgccctatccggctggagattgacctctccgccatccgccacaatttcctgttt
acccgccagcgcgctcaagccaagcgcctgttcgccgtggtcaaggccaatgcctacggc
cacgggatattggacactgcaaaggcgttggccgacttggccgacggttttgccctgctc
aatatcgaagacgccgtcgcgctgcgcgaagccggcatcgatcgccccatcgcgctgctg
gaaggcccgttcgacgccgccgaagccgccgccatgggcgaatatcggctctgcggcgcc
gtgcactcactagaacagatggcttggctggccaaaggttccgccgcgcggccggcggaa
gtctggctgaagatcaacagcggcatgaaccggctgggcttccgccccgagcaagccggc
gacgcgctggcccgcttgcgcgccgaacccgccatccgccccgccgccatcatgacccac
ttcgccaccgcggacgaagcctatggcgtcgacgagcagtggcgcgacttcgcaacgctg
gcccgcgacagcgccctgccggtcagcgccgccaactccgccgccctgctgcgccatccg
catacccacggcgacatcggccgccccggcatcgtcctgtacggcgcttcgccgtttgag
gactccaccggcgcggcgctgggcctgcggccggcgatgacgctgtcggccgacatcatc
gccgtgcagcagctgcgcaacggcgacgcggtcggctatggccgccgtttcgtcgcagac
cgcgacatgcgcatcggcatcgtcgcctgcggctatgccgacggctatccgcgcatcgcc
gccaacggcaccccggtggcggtggacggcgcggccagcggcacggtgggccgggtgtcg
atggacatgctggcggtggatctcagccatctgccgcaggccggcgtcggcagccgcgtc
gagctgtgggggccgcaagcgccgatcgagcgcgtggccgccgccgccggcaccatcagc
tatgagctgatgtgcgcggtggcggcacgggtgccgcgcagcctgcgcgcttaa
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