Chromobacterium subtsugae: U6115_06040
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Entry
U6115_06040 CDS
T11179
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
csut Chromobacterium subtsugae
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csut03036
]
U6115_06040 (xerD)
Chromosome and associated proteins [BR:
csut03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
U6115_06040 (xerD)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_integr_3
Motif
Other DBs
NCBI-ProteinID:
WSE92814
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All DBs
Position
1234663..1235550
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AA seq
295 aa
AA seq
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MNSDKDGIDAFLDQLWLSDGLSQNTLAAYRRDLAKLSGRLQAAGATLAQADAEQLRQALL
AGVDSEKPATRARLTSALRRYYQHLAQSGQRADDPSAGLATPKQGLRLPKSMSEQAVEAL
LLAPDVATPLGLRDRAMLEVLYASGLRVSELVGMTLTQLNLLDGVVKTMGKGSKERLVPL
GEIAQDWLLRYMREARPLLLAGLPCDAVFVTQRKAGMTRQMAWHLISQYAARQGLAKVSP
HVLRHAFATHLVNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHARHHPRG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggataaggacggcatcgacgcttttctcgaccaactgtggctgagcgacggc
ctgtcgcagaacacgctggcggcgtaccggcgcgatctggccaaattgtcaggccgtttg
caggcagcgggcgccacgctggcgcaggccgatgccgagcagctgcggcaagcgctgctg
gccggcgtcgacagcgaaaagccggcgacgcgggcgcggctgacatcggcgctgcgccgc
tattaccagcacttggcgcaaagcgggcaaagggccgacgatcccagcgccggactggcc
acgcccaaacagggactgcggttgcccaagtcgatgtcggagcaggcggtggaggcgctg
ctgctggcgccggacgtggcgacgccgctgggcctgcgcgaccgggcgatgctggaggtg
ctatacgccagcggcctgcgggtgtcggagttggtgggcatgacgctgacccagctgaac
ctgctggacggcgtggtgaaaacgatgggcaagggcagcaaggagcggctggtgccgctg
ggcgaaatcgcccaggactggctgctgcgctatatgcgcgaagcgcggccgctgctgctg
gccggcctgccgtgcgacgcggtgttcgtcacccagcgcaaagccggcatgacgcggcag
atggcctggcatttgatttcgcaatacgccgcgcgccaagggctggccaaggtcagtccg
cacgtgctgcgccacgccttcgccacccacctggtcaaccatggcgccgacctgcgggtg
gtgcagttgctattgggccatgccgacatttcgactacccagatctacacccacgtcgcg
cgcgaacggttaaagcagttgcacgcgcgccatcatccgcgcggctag
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