Chromobacterium subtsugae: U6115_06290
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Entry
U6115_06290 CDS
T11179
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
csut Chromobacterium subtsugae
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csut03009
]
U6115_06290
Enzymes [BR:
csut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
U6115_06290
Ribosome biogenesis [BR:
csut03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
U6115_06290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Methyltr_RsmF_N
Ubie_methyltran
Methyltransf_25
FtsJ
TRM5-TYW2_MTfase
NSUN5_fdxn-like
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
WSE93864
LinkDB
All DBs
Position
complement(1282019..1283272)
Genome browser
AA seq
417 aa
AA seq
DB search
MSHSQLKHLETVIGQMTRFDRPADAVLSAYFREHNKLGGADRHLIAETAFGALRRLIQLR
ALIAPEKATPRRLALVALMKFNKLNVKELTEATSAGEREWLGTVKGKTLEDSLEIRAELP
QWVIERLGEQEPSAVEALGQGLMSMAPLDLRVNTLKMKREELLDRLNAEGIHCEATPYSP
LGIRLKDKPALSKHELFKAGAFEVQDEGSQLLGLITGARRGEMVVDFCAGAGGKTLLLGA
QMSSSGRLYAFDVSEKRLANFKPRQARSGLSNVHPQLLAHENDAKVKRLAGKADRVLVDA
PCSGLGTLRRNPDLKFRQSPDSVAELNAKQASILASASRLVKSGGRLVYATCSLLPQENQ
AIVEAFLAEHADFRLLKMDEVLAEQKIPLQCGDYLELKPHLHNTDGFFAAVLERSAG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
attagccatagccaactgaaacacctggaaaccgtcatcggacagatgacccgcttcgac
cgcccggccgacgccgtgctgtccgcctatttccgcgagcacaacaagctgggcggcgcc
gaccgccacctgatcgccgaaaccgccttcggcgcgttgcgccgcctgatccagctgcgc
gcgctgatcgcgccggagaaagccacgccgcgccgcctggcgctggtggcgctgatgaaa
ttcaacaagctgaacgtcaaggaattgaccgaagccaccagcgccggcgagcgcgagtgg
ctcggcacggtcaaaggcaagacgctggaagacagcctggaaatccgcgcagagctgccg
caatgggtgatcgagcgcctgggcgagcaggagccgtccgcggtggaggcgctgggccag
ggcctgatgtcgatggcgccgctggacctgcgcgtcaacacgctgaagatgaagcgcgaa
gagctgctggaccgcctgaacgccgaaggcatccattgcgaagccacgccgtactccccg
ctgggcatccgcctgaaagacaagccggcgctgtccaagcacgagctgttcaaggccggc
gccttcgaggtgcaggacgaaggcagccagctcttgggcctgatcaccggcgcgcgccgc
ggcgaaatggtggtggacttctgcgccggcgccggcggcaaaacgctgctgctgggcgcg
cagatgtcatccagcggccgcctgtatgcgttcgacgtgtcggaaaagcgcctggccaac
ttcaaaccgcgccaagcccgctccggcctgtccaatgtgcacccgcaactgctggcgcac
gaaaacgacgccaaggtgaaacgcctggccggcaaggccgaccgcgtgctggtggacgcc
ccctgctccggcctgggcaccctgcgccgcaatccggacctgaaattccgccagagcccg
gacagcgtcgccgaactgaacgccaagcaggcgtccatcctcgcctccgcctcgcggctg
gtgaagagcggcggccgcctggtctacgccacctgcagcctgctgccgcaggaaaaccag
gccatcgtcgaggccttcctggccgagcacgccgacttccgcctgctgaagatggacgag
gtgctggccgagcagaaaatcccgctgcaatgcggcgattacctggagctgaaaccccat
ctgcataacaccgacggcttcttcgccgcggtactggaacgcagcgccggctaa
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