Chromobacterium subtsugae: U6115_08380
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Entry
U6115_08380 CDS
T11179
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U6115_08380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_08380
Enzymes [BR:
csut01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
U6115_08380
DNA repair and recombination proteins [BR:
csut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
U6115_08380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
WSE93252
LinkDB
All DBs
Position
1702485..1703384
Genome browser
AA seq
299 aa
AA seq
DB search
MPLLHCSIPLPPHFRPQDILAFHRRDGERLAEQVDGDGLRKGLSWRGAPACLALRFAGGE
ARLELALDGDGDGGDARLLEQTGRRMLGLAQPVEAFERRYRDHPQLGRLIAARPGMRVPQ
TATPFEALAWAITGQQISVQAAVSIRRRLLQLCGRRHSSGLLCHPDAAALAALDADQLGL
AGFSRAKSRALLALSQGAAAGELPLDDWLADMPAADILARLLAVPGIGPWTVSYALLRGY
GWLDGSLHGDVAVRRALQMVLATPDKVSAPDAQRWLEGFAPWRALVAAHLWALLQAGGF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctccactgttctatccccctgccgccgcacttccgtccgcaagacatcctg
gcctttcaccgccgcgacggcgagcggctggccgagcaggtggatggcgacggtctgcgc
aaggggctgtcatggcgcggcgcgccggcttgcctggctttgcgctttgccggcggcgaa
gcccggctggaattggcgctggacggcgatggcgatggcggcgacgcgcggctgctggag
cagaccgggcggcgcatgctgggcttggcgcagccggtggaggcgttcgagcggcgctac
cgcgaccatccgcaactgggccggctgatcgccgcgcgccccggcatgcgggtgccgcag
accgcgacgccgttcgaggcgctggcctgggcgatcaccggccagcagatcagcgtgcag
gccgcggtgagcatacggcggcgcctgctgcagctgtgcggccgccgccattcctccggt
ctgctgtgccatccggacgccgccgcgctggcggcgctggatgccgaccagctggggttg
gccgggttttcccgcgccaaaagccgcgccttgctggcgctgagccagggcgcggcggcg
ggggagctgccgctggacgattggctggccgacatgccggccgcggacattttggcgcgc
ctgctggcggtgccgggcatcgggccgtggacggtcagctacgcgctgctgcgcggctac
ggctggctggatggctcgctgcatggcgacgtggcggtgcggcgcgcgctgcagatggtg
ctggcgacgcccgacaaggtgtcggcgccggacgcgcagcgctggctggaaggcttcgcg
ccgtggcgggcgctggtggcggcgcacctgtgggcgctgttgcaggctggcggattctga
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