Chromobacterium subtsugae: U6115_09450
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Entry
U6115_09450 CDS
T11179
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
csut Chromobacterium subtsugae
Pathway
csut02020
Two-component system
csut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U6115_09450
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U6115_09450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csut03021
]
U6115_09450
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
csut02035
]
U6115_09450
Transcription machinery [BR:
csut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U6115_09450
Bacterial motility proteins [BR:
csut02035
]
Flagellar system
Flagellar assembly proteins
Stator
U6115_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
CTD3
UPF0122
Sigma70_r3
TetR_C_20
Motif
Other DBs
NCBI-ProteinID:
WSE93447
LinkDB
All DBs
Position
1911105..1911800
Genome browser
AA seq
231 aa
AA seq
DB search
MYAESYAPAPHAADESRQLALYAPLVKRAARQLASQAGGVFDREDMEQIGLMALLDCLRR
YGGEPDERFAGFAMLRIRGAILDELRRLDWRPRSVRQEAHRVRDGLRELRRKLRREPSEA
EAMTLLSLDADAYREALLAENAEAMASFDELVASGMELAAEDSPEARLERQSELARALTA
LNEREQQVIQLYYEFELSLKEIAAVLELTEARICQINKSALKKMQACLMAA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgaaagctacgcacccgctccccatgccgccgacgaaagccggcagctggcc
ttgtacgcgcccttggtgaagcgggcggcgcgccagctggccagccaggccggcggggtg
ttcgaccgcgaggacatggagcagatcggcctgatggcgctgctcgattgcctgcgccgc
tacggcggcgagccggacgagcgcttcgccggcttcgccatgctgcgcatccgcggcgcc
atcctggatgagttgcgacggctggactggcggccgcgttcggtcaggcaggaggcgcac
cgggtgcgtgacggcctgcgcgagctgcggcgcaagctcaggcgcgaaccgtccgaggcc
gaggcgatgacgctgctgagcctggacgccgacgcctaccgcgaagcgctgctggcggaa
aacgccgaggcgatggccagcttcgacgaattggtggcatccggcatggaattggcggcg
gaggattcgccggaggcgcggctggagcggcagagcgagctggcgcgcgcgctgaccgcg
ctgaacgagcgcgagcagcaggtgatccagctgtattacgaatttgaactgagtctcaag
gagatcgccgcagtgctggagctgaccgaggcccgcatctgccagatcaacaagagcgcc
ctgaaaaagatgcaggcctgcctgatggcggcctga
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integrated database retrieval system
