Chromobacterium subtsugae: U6115_12685
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Entry
U6115_12685 CDS
T11179
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
csut Chromobacterium subtsugae
Pathway
csut00300
Lysine biosynthesis
csut00470
D-Amino acid metabolism
csut01100
Metabolic pathways
csut01110
Biosynthesis of secondary metabolites
csut01120
Microbial metabolism in diverse environments
csut01230
Biosynthesis of amino acids
Module
csut_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U6115_12685 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U6115_12685 (dapF)
Enzymes [BR:
csut01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
U6115_12685 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WSE89744
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All DBs
Position
complement(2630503..2631333)
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AA seq
276 aa
AA seq
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MKLKFSKMHGLGNDFMVIDGVRQAVALTPERIRQLGDRQMGIGFDQLLLVEAPREVGHDF
RYRIFNNDGGEVEQCGNGSRCFVKFVCDEGLSDKSGIAVETARGVIRPEYLGDGMARVDM
GVPRFAPVDIPFIAEQEALSYPLELEDGPCVVSVASMGNPHAVQLVDDVDTAPVAAIGPQ
VESHPRFPERVNAGFMQIVSRGEVRLRVYERGAGETLACGTGACAAVVSGIRLGLLDARV
LVHARGGDMVIEWAGAGCPVIMTGPAVTVFQGEIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcagcaagatgcacggcctgggcaacgacttcatggtcatcgatggc
gtcaggcaggccgtggcgctcacgccggagcgcatccgccaactaggcgatcgtcagatg
ggcataggctttgatcagctgctgctggtggaggccccgcgcgaggtcggccatgatttc
cgttaccgcatcttcaacaacgacggcggcgaggtcgagcaatgcggcaacggctcgcgc
tgcttcgtcaaattcgtctgcgacgaggggttgagcgacaagtccgggatcgcggtggaa
accgcgcgcggcgtgatccgccccgaatatctgggcgacggcatggcccgggtggacatg
ggcgtgccccgcttcgcgcccgtagacatccccttcatcgccgaacaggaagcgctgagc
tatccgcttgagctggaagacggcccatgcgtcgtcagcgtcgcctcgatgggcaacccc
cacgccgtgcagctggtggatgacgtggacaccgccccggtggcggccatcggcccgcaa
gtggaaagccacccgcgcttccccgagcgcgtcaatgccggcttcatgcagatcgtctcg
cgcggcgaggtccgcctgcgcgtctacgagcgcggcgccggcgaaaccctggcctgcggc
accggcgcctgcgccgcggtggtgagcggcatccgcctgggcctgctggacgcgcgcgtg
ctggtccacgcccgcggcggcgacatggtgatcgaatgggccggcgctggctgcccggtg
atcatgaccggccccgccgtcacggtttttcagggcgagatagaactttaa
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