Chromobacterium subtsugae: U6115_14545
Help
Entry
U6115_14545 CDS
T11179
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
U6115_14545 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csut03019
]
U6115_14545 (rnc)
03009 Ribosome biogenesis [BR:
csut03009
]
U6115_14545 (rnc)
03036 Chromosome and associated proteins [BR:
csut03036
]
U6115_14545 (rnc)
Enzymes [BR:
csut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
U6115_14545 (rnc)
Messenger RNA biogenesis [BR:
csut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U6115_14545 (rnc)
Ribosome biogenesis [BR:
csut03009
]
Eukaryotic type
90S particles
RNase
U6115_14545 (rnc)
Prokaryotic type
rRNA processing factors
U6115_14545 (rnc)
Chromosome and associated proteins [BR:
csut03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
U6115_14545 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_MRPL44
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
WSE93893
LinkDB
All DBs
Position
complement(3037963..3038664)
Genome browser
AA seq
233 aa
AA seq
DB search
MDNRFRRLSQALDYAFQKPELLRQALTHRSYSSANNERFEFVGDSILNYTVARMLFDQFP
QLTEGELSRLRANLVNQNTLAEIAHELKLGDYLYLGEGELKSGGFNRPSILADALEATFA
AVSFDADFGAAEQVVRRLYDQRVSTIDTTRQAKDAKTRLQEALQARKLQLPKYRILSQSG
EAHEQWFKVECDLGELALISTGDGGSRRAAEQQAAEAALTLLEQKFAASKKKS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atcgacaaccgtttccggcgcctgtcccaggcgctggattatgctttccagaaaccggaa
ttgctgcgccaggccctgacgcaccgcagctacagcagcgccaacaacgagcgcttcgag
ttcgtcggcgacagcattctcaattacaccgtggcgcggatgctgttcgaccagtttccg
caactgaccgaaggcgaactgtcccggctgcgcgccaacctggtcaatcaaaacaccctg
gccgaaatcgcccatgagctgaaactgggcgactacctgtacctgggcgagggcgagctg
aaaagcggcggcttcaaccgcccgtccatcctcgccgacgcgctggaggcgactttcgcc
gccgtcagcttcgacgccgacttcggcgccgccgaacaagtggtgcgccgcctgtacgac
cagcgggtgtcgaccatagacaccacccgccaggccaaggacgccaagacccgcttgcag
gaagcgctgcaagcgcgcaagctgcagttgccgaagtaccgcatcctgtcgcagagcggc
gaggcgcatgagcaatggttcaaggtggagtgcgacctgggcgagctggccctgatatcc
accggcgacggcggcagccgccgcgccgccgaacagcaggcggccgaagcggccctgacc
ctgctggaacagaaattcgctgcgagcaagaaaaaatcatga
DBGET
integrated database retrieval system