Chromobacterium subtsugae: U6115_15420
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Entry
U6115_15420 CDS
T11179
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
csut Chromobacterium subtsugae
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csut03000
]
U6115_15420
03036 Chromosome and associated proteins [BR:
csut03036
]
U6115_15420
Transcription factors [BR:
csut03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
U6115_15420
Chromosome and associated proteins [BR:
csut03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
U6115_15420
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
NirdL-like_HTH
DDRGK
PCI
HTH_Crp_2
HTH_20
Fe_dep_repress
GntR
MarR_2
HTH_10
DUF7343
LexA_DNA_bind
DUF6262
Motif
Other DBs
NCBI-ProteinID:
WSE90270
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Position
3212602..3213090
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AA seq
162 aa
AA seq
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MKAISSSAKALDKMDRKILRILQKNARIAMTELAEKVGLSTTPCTERVRRMERDGIIEGY
YARLNPHALGGSLLVFVEIKLEAKSGNIFDAFRREIMSIPEILECHLVSGDFDYLIKARI
ADMSMYRKLLGDILLQLPSAKESKSYVVMEEVKETLALPLAD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaatatcctcctccgccaaagcgctggacaagatggaccgcaagatcctgcgc
atcctgcagaaaaacgcccgcatcgccatgaccgagctggccgagaaggtcggcctgtcc
accacgccgtgcaccgagcgggtgcggcgcatggagcgcgacggcatcatcgaaggctat
tacgcgcgcctgaatccgcacgcgctgggcggctccttgctggtattcgtggaaatcaag
ctggaggccaagtccggcaacatcttcgacgccttccgccgcgagatcatgagcattccg
gaaatcctggaatgccatctggtgtcaggcgatttcgattacctgatcaaggcgcgcatc
gccgacatgtcgatgtaccgcaagctgctgggcgacatcctgctgcagctgccgtcggcg
aaggaatccaagagctatgtggtgatggaggaagtgaaggagacgctggcgctgccgctg
gcggactaa
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integrated database retrieval system
