Chromobacterium subtsugae: U6115_17580
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Entry
U6115_17580 CDS
T11179
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csut Chromobacterium subtsugae
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csut03016
]
U6115_17580 (truB)
Enzymes [BR:
csut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
U6115_17580 (truB)
Transfer RNA biogenesis [BR:
csut03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
U6115_17580 (truB)
Prokaryotic type
U6115_17580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WSE90686
LinkDB
All DBs
Position
complement(3702097..3703020)
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AA seq
307 aa
AA seq
DB search
MSKPRSTKRQIDGVLLIDKPYDISSNNALQKARWLLNAAKAGHTGVLDPLATGLLPVCLG
EATKFSSYLLDADKGYRATVKFGAVTTTGDVEGEVVSERPVSFSREQLEAALASFRGEIS
QVPPMYSALKHQGKPLYEYARAGIEVPREARRVTIRKLELLAFDGVSAEIDVLCTKGTYI
RTLACDIGEALGSGAHLTALRRTATGGFGLDEAHTLAALEALEMAGREALLLPVDVLVQH
FPETELADGEIGKFMNGQAVLFAEKCEKMQRFRVYQKSTRRFMGLGEARDDGRLHPIRLL
ANQAATS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgcgcagcaccaagcgccagatcgacggcgtgctgctgatagacaagcct
tacgacatctccagcaacaacgcgctgcaaaaggcgcgctggctgctgaacgccgccaag
gccggccataccggcgtgctggacccgctggccaccgggctgctgccggtgtgcctgggc
gaggccaccaagttttcctcgtatctgctggacgccgacaagggctaccgcgccacggtg
aaattcggcgcggtgacgacgacgggcgatgtcgagggcgaagtggtgtccgagcggccg
gtcagcttcagccgcgaacagctggaagccgcgctggcgtcgttccgcggcgaaatcagc
caggtgccgccgatgtattcggcgctgaaacaccagggcaagccgctgtacgaatacgcg
cgcgccggcatcgaagtgccgcgcgaggcgcgccgggtgaccatccgcaagctggagctg
ctggccttcgacggcgtgtctgccgaaatcgacgtgctgtgcaccaagggcacctatatc
cgcaccctggcttgcgacatcggcgaagccttgggcagcggcgcgcatttgaccgcgctg
cgccgcaccgccaccggcggcttcggcctggacgaagcgcacacgctggcggcgctggag
gcgctggagatggccgggcgcgaagccttgctgctgccggtcgacgtgctggtgcaacat
tttccggaaaccgagctggccgacggcgaaatcggcaagttcatgaacggacaagccgtg
ctttttgctgaaaagtgtgagaaaatgcagcgcttccgggtataccaaaagtctacccgg
cgcttcatggggctgggcgaggcgcgcgacgatggtcgcctgcatccgatccggctcctg
gccaaccaggcggcaacgtcctga
DBGET
integrated database retrieval system
