Chromobacterium subtsugae: U6115_17605
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Entry
U6115_17605 CDS
T11179
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csut Chromobacterium subtsugae
Pathway
csut00061
Fatty acid biosynthesis
csut00071
Fatty acid degradation
csut01100
Metabolic pathways
csut01212
Fatty acid metabolism
csut02024
Quorum sensing
csut04146
Peroxisome
Module
csut_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
U6115_17605
00071 Fatty acid degradation
U6115_17605
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U6115_17605
09145 Cellular community - prokaryotes
02024 Quorum sensing
U6115_17605
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csut01004
]
U6115_17605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csut04147
]
U6115_17605
Enzymes [BR:
csut01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
U6115_17605
Lipid biosynthesis proteins [BR:
csut01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
U6115_17605
Exosome [BR:
csut04147
]
Exosomal proteins
Exosomal proteins of breast milk
U6115_17605
Exosomal proteins of breast cancer cells
U6115_17605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
WSE90691
LinkDB
All DBs
Position
3708795..3710474
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AA seq
559 aa
AA seq
DB search
MDKVWLKNYQAGVAHEIDINQFQSVTEVFDRSVKKFSDRPALACMGKVLSYAELDALSGQ
FASFLQHKLGLAKGDRVAVMMPNLLQYPVAVFGTLRAGGIVVNVNPLYTPRELEHQLKDS
GAETIVILENFAGVLEQVLPRTRVKNVVIASIGDMLGFAKGALVNFVVRKVKKMVPPWHI
PGHIRFNDALSAGAAKPYVKPALTHDDIAFLQYTGGTTGVAKGAELLHKNIVANMLQANA
WVKPLIREGQEVIVTALPLYHIFSLTANLMVFTNMGALNLLITNPRDIPGFIKEMKKYPV
TCITGVNTLFNALLNHPEFSKLDFSTWRLTLGGGMAVQKAVADKWKAVTGVTLAEAYGLT
ETSPAACINPMDLKEYNGTIGLPISSTDIEIRDAEGNPVAQGEQGELCIRGPQVMRGYWQ
RPDETAKVLGADGFLATGDMAMVTPEGFVKLVDRKKDMILVSGFNVYPNEIEDVVASHPD
VLEVACIGVPDDKSGEVVKVFVVKKNPALTDKDIIRHCRENLTGYKVPKLVEFRSELPKT
NVGKILRRALRDQETAKPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtgtggcttaaaaactaccaggctggggttgcccacgaaatcgacatcaat
cagttccagtcggtgaccgaggtgttcgaccgcagcgtcaagaaattcagcgatcggccc
gccctcgcctgcatgggcaaggtgctcagctacgcggagctggacgcgctcagcggccag
ttcgcgtccttcttgcagcacaagctgggcctggcgaagggcgaccgcgtggcggtgatg
atgcccaatctgctgcaatacccggtcgccgtgttcggcacgctgcgcgccggcggcatc
gtggtcaacgtcaacccgctgtacaccccgcgcgagctggagcaccaattgaaggactcc
ggcgcggaaaccatcgtcattctggagaacttcgccggcgtgctggagcaggtgctgccg
cgcacccgggtgaagaacgtggtgatcgcctccatcggcgacatgctgggcttcgccaag
ggcgcgctggtcaacttcgtggtgcgcaaggtgaagaagatggtgccgccgtggcacatt
cccggccacatccgcttcaacgacgccctctccgccggcgcggccaagccttacgtcaag
ccggcgctgacccacgacgacatcgccttcctgcaatacaccggcggcaccaccggcgtg
gccaagggcgcggagctgctgcacaagaacatcgtcgccaacatgctgcaggccaacgcc
tgggtcaaaccgctgatccgcgaaggccaggaagtgatcgtcaccgcgctgcctctgtac
catatattctcgctgaccgccaatctgatggtgttcaccaatatgggcgcgctcaacctg
ctgatcaccaatccgcgcgatatcccgggcttcatcaaggagatgaagaaatacccggtg
acctgcatcaccggcgtcaacaccctgttcaacgcgctgctgaaccacccggaattctcc
aagctggacttctccacctggcgcctgacgctgggcggcggcatggcggtgcaaaaagcg
gtggcggacaagtggaaggccgtgaccggcgtgacgctggccgaagcctacggcctgacc
gaaaccagcccggccgcctgcatcaatccgatggacctgaaggaatacaacggcaccatc
ggcctgccgatttcgtccaccgacatcgagatccgcgacgccgaaggcaatccggtggcc
cagggcgagcaaggcgaattgtgcatccgcggcccgcaggtgatgcgcggctactggcag
cgcccggatgaaaccgccaaggtgctgggcgccgacggcttcctcgccaccggcgacatg
gccatggtcacgccggaaggcttcgtcaagctggtggaccgcaagaaggacatgattctg
gtatccggcttcaacgtctatccgaacgagatcgaagacgtggtggccagccacccggac
gtgctggaagtggcctgcatcggcgtgcccgacgacaaatcgggcgaggtggtcaaggtg
ttcgtggtgaagaagaaccccgccctcaccgacaaggacatcatccgccactgccgcgaa
aacctcaccggctacaaagtgcccaagctggtggagttccgcagcgagctgcccaagacc
aacgtcggcaagatcctgcgccgcgcgctgcgcgaccaggaaaccgccaaaccggcctga
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