Chromobacterium subtsugae: U6115_19530
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Entry
U6115_19530 CDS
T11179
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03030
DNA replication
csut03430
Mismatch repair
csut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U6115_19530
03430 Mismatch repair
U6115_19530
03440 Homologous recombination
U6115_19530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csut03032
]
U6115_19530
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_19530
Enzymes [BR:
csut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U6115_19530
DNA replication proteins [BR:
csut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U6115_19530
DNA repair and recombination proteins [BR:
csut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U6115_19530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WSE91049
LinkDB
All DBs
Position
complement(4117556..4118971)
Genome browser
AA seq
471 aa
AA seq
DB search
MDRLNTLFEQPCAIVDLETTGGNISRDRITEVGVILIDGERVERHAWLVNPGQPIPPFIE
NMTGISNEMVAAARPFAELAEELLARLQGRLLLAHNARFDYGLLKNEFRRHGLRFQTRAL
CTVKLSRRLYPQHFKHSLDSLVARHGIDMPERHRALADAEAVYRFLRIAEGELGQGRLAH
EAEQLLSQPAELGDLAPQLQQQIEELPDSAGVYALFGAAGEALYVGRAANLYRKVLGHFA
KAKPGHKSHEVRIDEPVARVEWRESLGEFGAHLQELQWLRAYQPLHNPRARMLSEACSLQ
LRVEEDGFARLRAVSAQDIDFSRTTDLYGLFRHAREARKALAQIALAQGLCQAVLGVEQV
TSRKGVACNAYSLNRCRGACVGKEGADSHNLRLVSALQRLKVRQWPFEGAVAVVERDEVC
GDVVEHLFDRWCYLGSRRNGGELDGEPAFDLDYYKLLESELRKPERELAAQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatagattgaataccctgtttgaacaaccctgcgccatcgtcgatctggaaaccacc
ggcggcaatatcagccgcgaccgcatcaccgaggtgggggtgatcctgatcgacggcgag
cgggtggagcgccatgcctggctggtcaatcccggccagccgattccgccgttcatcgaa
aacatgaccggcatcagcaatgagatggtggccgcggcgcggccattcgccgaactggcc
gaggagctgctggcgcggttgcaaggccgcctgttgttggcgcataacgcccgcttcgac
tacgggttgctgaagaacgaatttcgccgccacggcctgcgcttccagacgcgggcgctg
tgcacggtcaagctgtcgcgccggctgtatccgcagcatttcaagcacagcctggatagc
ctggtggcgcgtcacggcatagacatgccggagcggcaccgcgcgctggccgatgccgag
gcggtgtaccgcttcctgcggatcgcggaaggggagctgggacaggggcgcctggcgcat
gaggcggagcaactgttgtcgcagccggccgaacttggcgatcttgcgccgcagttgcag
caacagatcgaggagctgcctgattcggctggcgtctatgcgctgttcggcgcggcgggc
gaggcgctgtatgtcggccgcgccgccaatctgtaccgcaaggtgctggggcatttcgcc
aaggccaagcccggacacaagagccacgaggtgcgcatcgacgagccggtggcgcgggtg
gagtggcgggagagcctgggcgaattcggcgcgcatctgcaggagctgcagtggctgcgc
gcctatcagccgctgcataacccgcgcgcgcggatgttgagcgaggcctgttcgctgcaa
ctgcgggtggaggaggacggtttcgcgcggctgcgcgcggtgtcggcgcaggatatcgat
ttcagccgcaccaccgatctttacggcctgttccgccacgcgcgcgaggcgcgcaaggcg
ctggcgcagatcgcgctggcgcaggggctgtgccaggcggtgctgggggtggagcaggtg
accagccgcaagggcgtagcctgcaacgcctacagcctgaatcgctgccgcggggcctgc
gtcggcaaggagggcgcggacagccataatctgcgcctggtgtcggccttgcagcgcctg
aaggtcaggcagtggccgttcgaaggggcggtggcggtggtggagcgcgacgaggtgtgc
ggcgacgtggtcgagcatctgttcgaccgctggtgctacctcggttcgcgccgcaacggc
ggcgaactggatggcgagccggctttcgatctggactactacaagttgctggagagcgag
ctgcgcaagccggagcgggaactggcggcgcagtga
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