Chromobacterium subtsugae: U6115_20830
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Entry
U6115_20830 CDS
T11179
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
csut Chromobacterium subtsugae
Pathway
csut00260
Glycine, serine and threonine metabolism
csut00270
Cysteine and methionine metabolism
csut00450
Selenocompound metabolism
csut00670
One carbon pool by folate
csut01100
Metabolic pathways
csut01110
Biosynthesis of secondary metabolites
csut01230
Biosynthesis of amino acids
Module
csut_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U6115_20830
00270 Cysteine and methionine metabolism
U6115_20830
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
U6115_20830
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U6115_20830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csut04147
]
U6115_20830
Enzymes [BR:
csut01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
U6115_20830
Exosome [BR:
csut04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
U6115_20830
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
WSE91294
LinkDB
All DBs
Position
complement(4371772..4372917)
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AA seq
381 aa
AA seq
DB search
MKFATRAIHVGYHSADHNRAVMPPLYQTSAFAYEHIGESMPYVYARSGNPTRSALESCLA
SLEDAKHGLAFSSGMAAIDAVLRACLKPGDEVVAVADLYGGAYRLLTRLLAPAGVKVTFA
DLREPAELEAAITAQTRLLWLESPTNPLLGMVDIAALSAIAHRHDVKVAVDNTFATPYLQ
QPLSLGADIVVHSATKYLAGHSDVLLGLVAVSDDKLYHDIRFVQNAAGAVPGPQDCFLTL
RGIKTLALRMERHCDNAEKVAAWLCGQERIAQVFYPGLPGHPGHELAKTQMKRFGGIISI
RLRDDSREAASRFASRLRLFVLAESLGGVESLINHSYTMSHGSMPADNKAALGIVEGGLR
LSIGIEDIDDLLADLEQALRD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcgcgacccgcgccatccatgtcggctaccacagcgccgatcacaaccgggcg
gtcatgcctccgctgtaccagacatcggcgtttgcgtatgagcacatcggcgagagcatg
ccttatgtctacgcccgcagcggcaaccccacccgcagcgcgctggagagctgcctggcc
agcctggaggacgccaagcacggcctggctttctccagcggcatggcggcgatagacgcg
gtgttgcgggcctgcctgaaaccgggcgacgaggtggtggcggtggccgacctctacggc
ggcgcctaccggctgctgacgcggctgctggcgccggctggcgtcaaggtgaccttcgcc
gacctgcgcgagccggccgaactggaggccgccatcactgcgcagacgcgcctgctgtgg
ctggagtcgccgaccaatccgctgctgggcatggtcgacatcgcggccttgtcggccatc
gcccatcgccatgatgtcaaggtggcggtggacaataccttcgccacgccttacctgcag
cagccgctgtcgctcggcgccgacatcgtcgtgcattcggccaccaagtatctggccggc
cattccgacgtgctgctggggctggtggcggtcagcgacgacaagctctaccacgatatc
cgcttcgtgcagaacgccgccggcgcggtgccggggccgcaggactgcttcctgaccttg
cgcggcatcaagacgctggccttgcggatggagagacactgcgacaatgcggaaaaagtg
gctgcctggctgtgcggccaggagcggatcgcccaggtgttctatccgggcttgcccggc
cacccgggccatgagctggccaagacgcagatgaagcgtttcggcggcatcatcagcatc
cgcctgcgcgacgacagccgcgaggccgccagccgcttcgccagccggctgcggctgttc
gtgctggcggagtcgctgggcggagtggagtcgctgatcaaccacagctataccatgtcg
cacggcagcatgccggccgacaacaaggccgcgctgggcatcgtcgagggcggcttgcgc
ctgtcgataggcatcgaggacatagacgacctgctggccgacctggaacaggcgctgcgc
gactga
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