Chromobacterium subtsugae: U6115_20975
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Entry
U6115_20975 CDS
T11179
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
csut Chromobacterium subtsugae
Pathway
csut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U6115_20975 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csut03400
]
U6115_20975 (recC)
Enzymes [BR:
csut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U6115_20975 (recC)
DNA repair and recombination proteins [BR:
csut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U6115_20975 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WSE91321
LinkDB
All DBs
Position
complement(4405592..4408789)
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AA seq
1065 aa
AA seq
DB search
MLFLYQSNRLEQLGELFCGMTQAMPLADPFAAETVIVQSRGMGRWITLDLARKAGVAANV
DFVLPAAFAWRLMQKVMPDLPRKSAFVPEVLAWRLLALLPTLDGEPFGPVRHYLEGGESA
AFELAGKIADIFDQYLVFRPDWIRAWESGALLGLGEDEAWQAALWRRLAESDPGRHRVRM
LDEFFSQLKSEHLPARVTLFGIASLAPMYLALVKRLSELTDVCLFTLNPCEAYWGDIVDA
RRKLRLRQAGDLFASEGHPLLASLGKQGRDFFELIAEDAELDAKPLFAAPKGSSLLARLQ
RDILELNDPAAAPAPMAADDHSVQLHACHGPMRELEVLKDRLLAMFADDPKLSPADVAVL
TPDINRYAPYIDAVFGRRDDAPNIPYSIADRRVEREQPLLSTFAAVLRLADSRFAADAVL
ALLDSPALLARFDLSEADLPFIQDWVRDAGIRWGRDAGHKAQLGLPADPLYTWRWGLDRL
LLGTVLPPALAGDAAGLFAGLLPHGGAQGQLGEALARFANCYDALDALAREWQAPASPRQ
WAERLHQACERLFLADGDDEAALETLRGVFAELAEDAELAGFDAAVGLPVARDWLLRQLG
VASAQGFLSGGVTFCAMVPMRSIPFKALCLIGMNDGAYPRDERPVSFDLVARHPRRGDRS
RRFDDRYLFLEAILSARQTLYLSYVGQSARSGETLPPSPLVAELMDSLSAMCGEDLAARL
TLRHPLQPFAPQAYDGADARLASFEPAFAAALAAPQAEPRPFLAPLPPEEPASVLNLHDF
IRFWKHPPRAWLAERLAIRLSGREDELAAREPFSMEADASRALRQQLVEAMLHRRPQAPL
RERAAAAGLLPCGELGQAWLQEEGRASVRLAGRLPRALAEETLPPQSVHLSLGGFTLVGE
LYGLRPEGRLSFIVGKLNAAQRIELWLTHLILCAARPAGIACHSAVYDDAGSTALADEID
AAGLLAPWLARWRQGQAQPLPFFGRTSWAYAEALAKAPDAREAALAAAWQKWQPGFVLEG
GMAQRDEPALALAFRHQQPLDDPLFAQLAETLLLPLAERLGGKER
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttctctaccaatccaaccgtctggagcaactgggcgagctgttctgcggcatg
acccaggcgatgccgctcgccgacccgttcgcggcggagacggtgatcgtgcaaagccgc
ggcatggggcgctggatcacgctggacctggcgcgcaaggccggggtggcggccaatgtc
gatttcgtgctgccggcggccttcgcctggcggctgatgcagaaggtgatgccggatttg
ccgaggaaatccgccttcgtgcccgaagtgctggcctggcggctgctggcgctgctgccg
acgctggacggcgagcccttcggcccggtgcgccattacttggaaggcggcgagagcgca
gctttcgagctggccggcaagatcgccgacattttcgaccaatacctggtgttccgcccc
gactggatccgggcctgggagagcggcgcgctgctgggcctgggcgaggacgaagcctgg
caggcggcgctgtggcgtcggctggccgagagcgaccccggccgccaccgggtgcggatg
ctggacgaattcttctcccagctcaaaagcgagcacctgccggcacgggtgacgctgttc
ggcatcgccagcctggcgccgatgtacctggcgctggtcaagcggctgtccgagctgact
gacgtctgcctgttcaccctcaatccctgcgaggcctactggggcgacatcgtcgacgcc
cgccgcaagctcaggctgcgccaggccggcgacctgttcgccagcgaaggccacccgctg
ctggcctcgctgggcaagcaggggcgcgatttcttcgagctgatcgccgaggacgccgag
ctggatgccaagccgctgttcgccgcgcccaagggaagcagcctgctggcgcggctgcag
cgcgacatcctggagctgaacgacccggccgccgcgccagcgccgatggcggcggacgat
cactcggtgcagctgcacgcctgccacggtccgatgcgcgagctggaggtattgaaggac
cggctgttggcgatgttcgccgacgaccccaagctcagcccggccgacgtggcggtgctg
acgccggacatcaaccgctacgcaccgtatatcgacgcggtgttcggccgccgcgacgac
gcccccaatatcccctacagcatcgccgaccgccgggtggagcgcgagcagccgctgctg
tccaccttcgccgcggtgctgcggctggccgattcgcgcttcgccgccgacgcggtgctg
gcattgctggacagcccggcgctgctggcgcgtttcgacctctccgaagccgatctgccc
ttcatccaggactgggtgcgcgacgccggcatccgctggggtcgcgacgccgggcacaag
gcgcagctgggcctgccggccgacccgctctacacctggcgctgggggctggataggctg
ctgctgggcacggtgctgccgccggcgctggccggcgacgccgccggcctgttcgccggg
ctgctgccccacggcggcgcgcaggggcagttgggcgaggcgctggcgcgtttcgccaac
tgctacgacgcgctggacgcgctggcgcgcgaatggcaagccccggcttcgccgcggcaa
tgggccgagcgcctgcaccaggcctgcgagcggctgttcctggccgatggcgacgacgag
gccgcgctggagacgctgcgcggcgtcttcgccgaactggccgaagacgccgagctggcc
ggcttcgacgccgcggtgggcttgccggtggcgcgcgactggctgctgcgccagctgggc
gtggcctcggcgcagggcttcctgtccggcggcgtcactttctgcgcgatggtgccgatg
cgctccatccccttcaaggcgctgtgcctgatcggcatgaacgacggcgcctacccgcgc
gacgagcgcccggtcagcttcgacctggtggcgcgccacccgcgccgcggcgaccgctcg
cgccgcttcgacgaccgctacctgttcctggaagccattctgtcggcgcggcagacgctg
tacctgtcttatgtcggccagtcggcgcgcagcggcgaaacgctgccgccgtcgccgctg
gtggcggagttgatggatagcctgtcggcgatgtgcggcgaggacctggccgccaggctg
acgctgcgccatccgctgcagccgttcgcgccgcaagcctatgacggcgccgacgcgcgg
ctggccagcttcgagccggccttcgccgccgcgctggcggcgccgcaggccgagccgcgg
cccttcctcgcgccgctgccgccggaggagccggccagtgtgctcaacctgcacgatttc
atccgtttctggaaacatccgccgcgcgcctggctggccgagcggctggcgatccggctg
tccggccgcgaggacgagctggccgcgcgcgagccgttcagcatggaggccgacgccagc
cgggcgctgcgccagcaattggtagaggcgatgctgcaccgccggccgcaggccccgctg
cgcgagcgggccgccgccgccggcctgctgccctgcggcgagctgggccaggcctggctg
caggaggaaggccgcgccagcgtgcggctggccggcaggctgccgcgcgcgctggcggag
gaaaccctgccgccgcagtcggtgcacctgagcctgggcggcttcaccctggtgggggag
ctgtacgggctgcggccggagggccggctcagcttcatcgtcggcaagctcaacgccgcc
cagcgcatcgaattgtggctgactcacctgatcctgtgcgcggcgcggccggcgggcatc
gcctgccacagcgcggtttacgacgacgccggcagcaccgcgctggccgatgagatcgac
gccgccggcctgctggcgccgtggctggcgcgctggcgccagggccaagcgcagccgctg
ccctttttcggccgcaccagctgggcctacgccgaggcgctggccaaggcgccggacgcg
cgcgaggcggcgctggccgccgcctggcagaaatggcaacccggcttcgtgctggagggc
ggcatggcgcagcgcgacgagccggcgctggcgctggccttccgccatcaacagccgctg
gacgacccgctgttcgcccagctggcggaaaccctgttattgccgctggccgagcgcctg
ggcggaaaagagcgatga
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