Chromobacterium subtsugae: U6115_21730
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Entry
U6115_21730 CDS
T11179
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
csut Chromobacterium subtsugae
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csut03021
]
U6115_21730 (rpoH)
Transcription machinery [BR:
csut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U6115_21730 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_PafC
UCR_14kD
LisH_2
Motif
Other DBs
NCBI-ProteinID:
WSE91457
LinkDB
All DBs
Position
4545236..4546099
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AA seq
287 aa
AA seq
DB search
MNTTFALPVPSTSGSLEQYIQAVNSVPMLSPEQETELATRFQQENDLEAARQMVLSHLRV
VVSVSRGYAGYGLQQADLIQEGNIGLMKAVKRFEPGRGVRLFSFAIHWIKAEIHEFILRN
WRLVRIATTKPQRKLFFNLRSMKSGFSALSEQEAKSIAADLGVKPEEVREMEIRMNGQDV
SLLADSDDEDSYAPIDWLADSHSEPTRALERRAFDHLQSEGLEYALSTLDARSRRIVEAR
WLADDSGSTLHELAAEFGVSAERIRQIEAKALTKMKAALSEGVVLDN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacatttgccctgcccgttccgtcgaccagcggcagcctggagcagtacatc
caggcggtaaacagcgtccctatgctgtcgccggagcaggaaaccgagctcgcgacccgt
ttccagcaggaaaacgacctggaagcggcccggcagatggtgctgtcgcacctgcgcgtg
gtggtgtcggtatcgcgcggttacgccggttacggcctgcagcaggccgacctgatccag
gaaggcaatatcggcctgatgaaggcggtgaagcgcttcgagccgggccgcggcgtccgc
ttgttctcgttcgccatccactggatcaaggccgagatccacgaattcatcctgcgcaac
tggcgcctggtgcgcatcgccaccaccaagccgcagcgcaagctgttcttcaacctgcgc
agcatgaagagcggcttctccgcgctgtccgaacaggaagccaagtccatcgccgccgac
ctgggcgtcaagcccgaggaagtgcgcgaaatggaaatccgcatgaacggccaggacgtg
tccctgctggccgacagcgacgacgaggacagctacgcgccgatagactggctggccgac
tcgcacagcgagccgacccgcgcgctggaacgccgcgctttcgaccacttgcagtcggaa
ggcctggagtacgcgctgtcgacgctggacgcccgcagccgccgcatcgtcgaagcgcgc
tggctggccgacgacagcggctcgacgctgcacgaactggcggccgaattcggcgtgtcg
gccgagcgcatccgtcagatcgaggccaaggcgctgaccaagatgaaggccgcgctcagc
gagggcgtggtgctggacaactga
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