Chromobacterium subtsugae: U6115_21810
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Entry
U6115_21810 CDS
T11179
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
csut Chromobacterium subtsugae
Pathway
csut02020
Two-component system
csut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U6115_21810
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U6115_21810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csut02022
]
U6115_21810
Two-component system [BR:
csut02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
U6115_21810
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA_16
AAA_2
AAA
FleQ
NACHT
nSTAND3
IstB_IS21
AAA_30
TIP49
TsaE
Motif
Other DBs
NCBI-ProteinID:
WSE91473
LinkDB
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Position
4562760..4564100
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AA seq
446 aa
AA seq
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MNAPARIVLVDDDPDLLCLVRLRLEAAGHEVEALSSAEAALTALAARRADLLLTDWRLPG
MDGLQLFETARRRYPTLPVILFTAHGTVPDAVEAVSRGVFCYLEKPFDGQLLLDKVAQGL
TLSAGDGAAGDAWRAGIVSRGPAMEELLSEARMVAATDASVLLQGESGSGKEVLARAIHQ
ASRRAGRPFVAVNCGAIPENLLESELFGHEKGAFTGAAVRHEGLIRQADGGTLFLDEIGD
MPLPLQVKLLRVLQDREVRPVGGARPLPVDIRLLSATHRDLPARIADGQFREDLYYRLNV
VALTLPPLAERREDIPLLAQHFLQQVSARYGKTVTGFAPDALAFLAAARWPGNIRQLANV
VEQCCVLATGPLLTLAQVEKAVAGEAQAIPTLADARREFERDYLERLLRLTGGNVSDAAR
LADRNRTEFYRLLQKHELNAAAFQDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgcccgcatcgtcctggtggacgacgatcccgacctgctgtgcctggtg
cggctgcggctggaagccgccggccacgaggtggaggcgctctccagcgccgaagccgcg
ctgacggcgctggccgctcgccgcgccgacctgctgctgaccgactggcggctgccgggc
atggacggcctgcagctgttcgaaaccgcgcgccgccgctatccgacgctgccggtcatt
ctgttcaccgcgcacggcaccgtgccggacgcggtggaggcggtcagccgcggcgtgttc
tgctatctggagaaaccgttcgacggccagctgctgctggacaaggtggcgcagggcctg
acgctgtcggcgggcgacggcgccgccggcgacgcttggcgcgccggcatcgtcagccgc
ggcccggcgatggaggagctgctgagcgaagcgcggatggtagccgccaccgacgccagc
gtgctgctgcaaggcgaaagcggcagcggcaaggaggtgttggcgcgcgccatccaccag
gccagccgccgcgccggccggcccttcgtcgccgtcaactgtggcgcgattccggaaaac
ctgctggaaagcgagctgttcggccacgaaaaaggcgccttcaccggcgccgccgtccgc
cacgagggcctgatccgccaggccgacggcggcacgctgttcctggatgagatcggcgac
atgccgctgccgctgcaggtcaagctgctgcgggtgctgcaggaccgcgaggtgaggccg
gtgggcggcgcccggccgctgccggtggatatccgcctgctgtccgccacccaccgcgac
ctgccggcccgcatcgccgacggccagttccgcgaggatctctattaccgcttgaacgtg
gtggcgctgacgctgccgccgctggcagagcggcgcgaagacatcccgctgttggcccag
catttcctgcaacaggtctcagcgcgctacggcaagacggtgacgggcttcgccccggac
gccctcgccttcctcgccgccgcacgctggccgggcaatatccgccagttggccaatgtg
gtggagcagtgctgcgtgctggccaccggccccttactgaccctggcccaggtggagaag
gcggtggcaggcgaggcgcaggccattccgacgctggccgacgcgcgccgcgaattcgag
cgcgattacctggaacgcctgctgcggctgaccggcggcaatgtcagcgacgccgcccgg
ctggccgaccgcaaccgcaccgagttctaccggctgctgcaaaagcatgagctgaacgcc
gccgcgttccaggacgattga
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