KEGG   Cucumis sativus (cucumber): 101202819
Entry
101202819         CDS       T02486                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101202819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101202819
   03036 Chromosome and associated proteins [BR:csv03036]
    101202819
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101202819
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     101202819
    COMPASS/SET1 complex (yeast)
     101202819
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 KNTC1_N Beta-prop_WDR35_TULP_N VPS11_N Cytochrom_D1
Other DBs
NCBI-GeneID: 101202819
NCBI-ProteinID: XP_004134865
UniProt: A0A0A0KJC5
LinkDB
Position
6:complement(27766452..27770136)
AA seq 332 aa
MGGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHKTSSYLVTASDDESIRL
YDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGH
HDRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAF
GGYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTL
LSTYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIK
WAPGSLMFATGSSELSFWIPDLSKLGAYVDRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atgggagggtctcaatccgaaagggaggagaaagtgtctttggagctaactgaagaaatc
cttcaaagcatggaagtcggcatgacattcagagactataatggtagaatcagttcaatg
gattttcacaagacttcaagctatctggtgactgcaagtgacgatgaatccatccgactt
tatgatgttgccagtgcaacatgtttgaaaacaattaacagcaaaaagtacggggttgat
ctggtttgctttacttctcaccctacaacagtgatatattcttccaaaaatgggtgggac
gagtctctgcggcttctctccttgaacgacaataagtacctgcggtactttagaggtcat
cacgacagagttgtatcactcagcttatgcgctcgcaaagaatgctttatatctgggtct
cttgatcgaactgttttgctttgggatcaaagggcagagaaatgccagggtctcttacgt
gtacaaggaaagccagctacagcatatgatgagcaaggtgtggtctttgccattgccttt
ggaggttacataaggatgtttgatgctcgcaaatatgagaagggtcctttcgatatattt
tctgttggggaggatctatctgatgcaaatattgtaaagttcagtaatgatgggagactc
atgttgttgacgacttcagatgggcatattcatgttcttgattctttcagaggaacacta
ttatctacgtacaatgtaaaacccatttcaaggaatttgacgttggaggcatcttttagt
ccggagggaatgtttgtgatatcaggttcgggagatggcagtgtttatgcttggagtgta
aggagtggaaaagaggttgcaagctggatgagcactgaaatggaacctcctgtcataaag
tgggctccgggaagtctaatgtttgcaacgggatcttctgaactgtcattttggataccc
gatttgtctaaattgggagcttatgtagacagaaaatag

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