Cucumis sativus (cucumber): 101203341
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Entry
101203341 CDS
T02486
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101203341
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
101203341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
New_glue
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
101203341
NCBI-ProteinID:
XP_031736889
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Position
2:24620207..24623809
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AA seq
739 aa
AA seq
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MVEFAPNTNTASAPDGLLHDSSKLKNSEPLDSFDSKAIDYSLVDSFLDYDSLNDWFDELT
SPNMVDTQTLLPEGDAHLSQSVQKSVPVIDGVQSNFVRSEDFKIEMKTSGEACSNSTDFN
SITEEGMPKVTLVLDGEACSNSTDFNSIIEEGMSKVSLVLDGGCISKVELESEADDGEGD
VESEGTSSASTSSSSSSGGSSDNEVDEEEEDSSSSTSAGCDDEEEKENIVEAEGKREIGE
LEEGEIRDADDEDEEAFADDMVAWDNDGEDLKEDDEDLDGEEEEAGAEGGPITSKNELKV
LPPVPQVHATLQPHHQMLPVGVVLSMLGNQVIVEGVEKHNPLSEGSILWITEARSPLGLV
DEIFGPVKNPYYSVRYNSESEVPLGISGGTHVSFVLEFADYVLNNKDLYKKGYDASGVND
EEVSDDGEFSDDEKELEFKKMQRLAKRAMNDNQQINANKNNGRKKKNNAKARKFGERTFE
NANVPDEPKKFYGQCTPEQAKISEGRKFDHPTPHQAKMDMVRPSPNQNQQTGPPLAPFVY
HGGCPNPSVAEQCFMNGTGIMSSFPPTYNPCFTPAMNGIRPAEMPFQFQQQQNPFFPNGL
PMNGMPWLLQNPAQQMPQMPQMPQMPQMPQMPQMPMLNTFAGAAYPQGFVGPSSALPNSS
TAVGAQGIHSGGLQFGQNQNNLQPAAQQFNPPNSHPPGTFSGNVAPQQFNQNSSSKQGRK
SHGRGGNHFRGRRGGRQSR
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtagagtttgctcccaacaccaacactgcttctgcccccgacggccttcttcacgat
tcttctaagcttaagaactctgaaccacttgactcttttgactccaaggccatcgattac
tcactcgtcgattccttcctcgattacgattctttaaatgactggtttgacgaattaaca
tcgcccaatatggtcgatacacaaacgcttcttcctgaaggagatgcccatttgagtcaa
tccgttcaaaagtctgttccagttattgatggagttcaatcaaattttgtcaggtctgaa
gattttaaaatagaaatgaagacgagtggtgaggcttgtagtaactctacagatttcaat
tccatcactgaagaagggatgccaaaggttaccttggttcttgatggtgaggcttgtagt
aactctacagatttcaattccatcattgaagaagggatgtcaaaggttagcttggttctt
gatggtgggtgcatttcgaaggttgagttggagtctgaagcggatgatggtgaaggtgat
gtggagtcagagggcacaagttcagcttcaacatctagtagtagtagctctgggggaagt
agcgacaatgaagtagatgaagaggaagaggattcatcttcttccactagtgccggttgc
gatgatgaagaagagaaggagaacattgtagaagcggagggaaagagagaaattggtgaa
cttgaagaaggtgagataagggatgctgatgatgaggacgaagaagcttttgcagatgac
atggttgcgtgggataatgacggtgaagacctcaaggaggatgacgaagaccttgatgga
gaagaggaagaggctggggctgaaggagggccaattacttctaaaaatgagcttaaggtt
cttcctccagttcctcaagtgcatgctacgttgcagccgcaccaccaaatgcttcctgtt
ggagttgttttgtcaatgcttggcaatcaagtcattgtagagggtgttgagaagcacaat
cctctcagcgaaggctctattctttggataactgaagctagatctccattggggttggta
gatgaaatctttggacctgtaaaaaatccttactattctgtaaggtacaattctgaaagt
gaagttcctcttggaattagtggtggtacccacgtctccttcgttcttgagtttgcagat
tatgttctaaataacaaagacctatacaagaaggggtatgatgcatctggagtgaatgat
gaagaggtgtcagatgatggtgagttctcagatgatgagaaagagcttgagttcaagaaa
atgcaaaggttggctaagagggctatgaatgataaccaacagatcaatgcaaacaaaaat
aatggtaggaagaagaaaaacaatgctaaagccaggaaatttggtgagcgtacatttgag
aatgcgaatgttcctgatgagcccaagaaattttacggccagtgcactcctgagcaagca
aaaatatctgaaggcagaaaatttgatcaccctacaccacatcaagcaaagatggatatg
gttaggccatctccgaatcaaaaccagcaaactggccctcctttggcaccatttgtatat
cacggtggttgtccaaacccttcagttgcagaacaatgctttatgaatggaactggtatt
atgtcatcgtttccccctacgtacaacccctgctttacaccagcaatgaatggtattagg
ccagcagaaatgccatttcagtttcagcagcagcagaatccgttctttcccaacggtctt
ccaatgaatggcatgccttggttattacagaatcctgcacaacaaatgccacaaatgcct
caaatgcctcaaatgcctcaaatgcctcaaatgcctcaaatgcctatgctgaatacattt
gctggagcagcttatccacaggggttcgtaggtccatcatctgccctacctaattcctcg
acagcggtaggggcacaaggaatccattccggtggactacagtttggacagaatcaaaac
aacttgcagcctgcagcacaacaattcaatcccccaaactcgcacccgccaggtacattt
tcaggaaacgtagcaccacaacagtttaaccaaaactcatcttcaaagcagggaagaaaa
tctcatggtcgcggaggaaatcattttagaggtagaagaggtggacgacaaagtagatga
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