KEGG   Cucumis sativus (cucumber): 101203512
Entry
101203512         CDS       T02486                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03420  Nucleotide excision repair
csv04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101203512
  09124 Replication and repair
   03420 Nucleotide excision repair
    101203512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csv04121]
    101203512
   03400 DNA repair and recombination proteins [BR:csv03400]
    101203512
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csv04147]
    101203512
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     101203512
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101203512
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101203512
Exosome [BR:csv04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101203512
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 101203512
NCBI-ProteinID: XP_004149667
LinkDB
Position
1:complement(19369054..19381356)
AA seq 833 aa
MSLPTKRSATATANANANTNTNTAATSFLSSSSSSPTSTPPSSISSPPMKKTKSQPLDPN
KNGLHHHDDPDFDPSSMPLDDEDLKPPHHSPLIGASRSVATNLSRKKATPPQPAKKLVIK
LLKAKPTLPANFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLHKMGGNLYRRI
EKECEVHISAALQSLVGQSPDLVVFLAYVEKCWQDFCDQMLMIRGIALYLDRTYVKQTPS
VCSLWDMGLQLFRKHLSLSSEVEHKTVTGLLRMIEKERLGEAINRTLLNHLLKMFTALGI
YSESFEKPFLEYTSEFYAAEGMKHMQQSDVSEYLKHAEGRLQAEQDRCLHYLDSSTRKPL
IATTERQLLERHISAILDKGFTLLMDGNRMGDLLRMYTLISRVNALESLRQALSSYIRRT
GQNIVMDDEKDKDMVSSLLEFKASLDTIWEESFSKNEAFCNTIKDAFEHLINLRQNRPAE
LIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSA
SIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMSVH
VLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGHCVLKAEFPKGK
KELAVSLFQTVVLMLFNDAEKLSLQDIRESTGIEDKELRRTLQSLACGKVRVLQKIPKGR
DVEDNDSFVFNDGFTAPLYRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKT
RKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2502 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacgctctgctaccgccaccgccaacgccaacgccaacaccaac
accaacaccgccgccacctcctttctctcttcttcttcttcttcacccacttccaccccc
ccttcctctatctcttcccctcctatgaagaaaaccaaatcccaaccacttgaccccaac
aaaaacggactccaccaccacgatgaccccgatttcgacccttcttctatgccccttgat
gacgaagatctcaaaccaccccatcactcccctctcattggcgctagccgctccgtagct
accaatttgtcccgtaagaaagccactccccctcagcctgctaagaaactcgttatcaag
cttctcaaagcaaaaccgacactccctgctaattttgaggaggatacatgggcaaagttg
aaatcagccatatgtgccatattcttgaagcaacctaattcttgtgatttggagaagctt
tatcaggctgttaacgatctttgcttgcacaaaatgggtggtaacctttatcggcgaatc
gaaaaggagtgtgaagtacacatatctgcagcattgcagtctttggttgggcaaagccca
gatttggtggttttcttggcatatgttgagaaatgctggcaagatttttgtgatcagatg
ttgatgattcgtggcattgccctgtatcttgacaggacttatgtcaaacaaacaccaagt
gtgtgctcattatgggacatggggttgcaacttttcagaaagcatttatctttatcttca
gaggttgagcacaaaactgttactgggctattaagaatgatcgagaaagaaaggctaggt
gaagcaattaatcggactctcctaaaccacctcttgaagatgtttaccgcactaggaatt
tactcagaaagctttgaaaagccattccttgaatacacttctgagttttatgctgctgaa
ggcatgaaacacatgcagcagtcagatgtttcagaatatttaaagcatgcagagggaagg
ttgcaggcagagcaagatagatgtttgcactatcttgattcaagtacaagaaagccattg
atagcaactacagaaagacaactccttgaacgtcatatatctgcaattcttgataaggga
tttacattgctgatggatggcaaccgtatgggagatcttctgagaatgtacacgcttata
tcaagagtcaatgcccttgaatcactaagacaagcccttagctcatatatacgaagaact
gggcaaaatattgtcatggatgatgagaaggacaaagatatggtctcatcccttttagaa
ttcaaggcttctctggatacaatatgggaagaaagcttttcaaagaatgaagctttttgc
aatacaataaaggatgcatttgaacatcttattaatcttcgtcagaatcgcccagctgaa
ttgattgctaagtttctggatgaaaagctccgtgctggaaataagggtacttctgaagaa
gaattggagggtacactagacaaagtgttggttctgttcaggtttattcagggcaaggat
gtgtttgaagccttttacaagaaggatcttgcaaagaggttacttctaggaaagagtgct
tccattgatgcagaaaagtcaatgatttccaaactgaagacagagtgtggtagtcagttt
acgaacaaacttgaaggaatgtttaaggacattgaattgtctaaagagataaacgaatcg
ttcaagcaatcatctcaagcgaggacaaagctccccatggggattgagatgagtgttcat
gtcttgactactgggtactggccaacttaccctcccatggatgttaggcttccccatgag
ttgaatgtctaccaggacattttcaaagagttctatttgagtaagtacagtgggagacgc
ttaatgtggcataattcattaggccactgtgtgctgaaagccgagttcccaaaaggtaaa
aaggagttggcagtttccctatttcagaccgtggtcttaatgcttttcaacgatgctgag
aaacttagtcttcaagatattagagaatctactggaattgaggataaagaactcaggagg
actttacagtcacttgcctgtggaaaagttagagtactacaaaagataccaaaaggcaga
gatgttgaggacaatgattcgtttgtgttcaatgatggatttactgctccactttaccgt
cttaaggtaaatgctattcagatgaaggaaacggtagaagagaataccagcactacagaa
agagtctttcaggaccgtcaatatcaggttgatgctgctattgttcgaattatgaaaacc
cgaaaagtgctaagtcacactcttctgataactgagctcttccaacagttaaagtttcca
ataaagccagctgatttgaagaagcggattgaaagtcttatcgatagagagtatctagaa
cgtgacaagaacaaccctcagatatacaattaccttgcctaa

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