Cucumis sativus (cucumber): 101203641
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Entry
101203641 CDS
T02486
Name
(RefSeq) TMV resistance protein N
Organism
csv
Cucumis sativus (cucumber)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
TIR
LRR_4
AAA_16
TIR_2
AAA_22
NACHT
nSTAND3
AAA_14
AAA
LRR_3
LRR_8
AAA_18
DO-GTPase2
RimM
DUF2122
Motif
Other DBs
NCBI-GeneID:
101203641
NCBI-ProteinID:
XP_031741454
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Position
5:complement(31324099..31333791)
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AA seq
1212 aa
AA seq
DB search
MAGSSSHPSQMAFDAFLSFNRDEEDDGYRRFIKDLYETLSEWGIKMFMDEEVNLSDNIVK
AIEGSITSMVVLSEGYASSKWCLRELVKIIDQKKKTKHQVLPLFYGGRVAPPPPPRPLFK
QWEGRSLRSLSRNRETDAYSEVGSMTSRQVKFRYQHAFEKFINSEAKKDYLKEVDKWWLS
VLEVSDLPGVDIPQRISYTKFKIQSIANSIGDHLLRLKLQAKEENLFEMPLRLRTMKMLL
GLGSNDVRFIGIVGMSGIGKTTLAEMTYLRIFKPFVSALRKPYFLHFVGRSIVSLQQQLL
DQLAFLKPIDIQVLDENHGVELIMQHLSSLKNVLIVFDGITERSQLEMLAGSPDWFGAGS
RIIITTTNKNIFHHPNFKDKVQEYNVELLSHEAAFSLFCKLAFGDHPHTQNMDDLCNEMI
EKVGRLPLALEKIAFSLYGQNIDVWEHTLKNFHQVVYDNIFSDVLKSSYEGLEAESQQIF
LDLACFLNGEKVDRVIQILQGFGYTSPQTNLQLLVDRCLIDILDGHIQMHILILCMGQEI
VHRELGNCQQTRIWLRDDARRLFHENNELKYIRGIVMDLEEEEELVLKAKAFADMSELRI
LRINNVQLSEDIECLSNKLTLLNWPGYPSKYLPSTFQPPSLLELHLPGSNVERLWNGTQN
FKNLKEIDASDSKFLVETPNFSEAPKLRRLILRNCGRLNKVHSSINSLHRLILLDMEGCV
SFRSFSFPVTCKSLKTLVLSNCGLEFFPEFGCVMGYLTELHIDGTSINKLSPSITNLLGL
VLLNLRNCIRLSSLPTEICRLSSLKTLILNGCKNLDKIPPCLRYVKHLEELDIGGTSIST
IPFLENLRILNCERLKSNIWHSLAGLAAQYLRSLNDLNLSDCNLVDEDIPNDLELFSSLE
ILDLSSNHFERLSESIKQLINLKVLYLNDCNKLKQVPKLPKSIKYVGGEKSLGMLRTSQG
KTDNKLVLSHKTSLVGMENQVKKVCNLLDLERSKDILFVGIFGSSGIGKTTIAEVVYNTI
IDEFQSGCFLYLSSKQNSLVPLQHQILSHLLSKETKIWDEDHGAQLIKHHMSNRKVVIVL
DGVDERNQIEKLVGSPNWFAPGSRVIITATNRDVLHQLNYRDQVQEYKVELLSRESAYSL
FCKNAFGDGPSDKNDLCSEIVEKVGRLPLALRTIGSYLHNKDLDVWNETLKRLDEEEQNY
FDTILKRNVEKI
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggctggttcctcatctcatccttctcaaatggcttttgatgctttcttaagtttcaac
agagacgaggaagacgatggctaccgacgtttcattaaggatttatatgagactcttagc
gaatggggaatcaagatgtttatggatgaggaggttaatctgagtgataatatagtgaaa
gcaattgaaggatcaatcacttccatggttgttttatcagaggggtatgcttcttccaag
tggtgtttgagagagttggttaaaataatagatcaaaaaaagaaaaccaaacaccaagtc
cttcctttgttttatgggggtagggtcgcaccaccacctccaccaagacctttatttaag
cagtgggaaggaagatctttacgaagtctaagtaggaacagggagaccgatgcttatagc
gaagtgggttctatgacgtctaggcaagttaagtttcgatatcaacatgcttttgaaaaa
ttcattaatagtgaggcaaaaaaggattacttgaaggaagtcgacaagtggtggttgtct
gtgttagaagttagcgatctccctggagtagatataccacaaaggatttcctatacaaag
ttcaaaatccaatccatcgcaaattcaataggtgatcacttgcttcgtcttaagctccaa
gccaaagaagaaaatttatttgaaatgccacttcgattaagaacaatgaaaatgctcctt
ggcttaggctcaaatgacgtacgttttatagggatagtggggatgagtggtattggtaaa
acaacccttgcggaaatgacatatttacgtatttttaagccttttgtatctgccttacga
aaaccttactttcttcactttgttggacgcagtatagtctccttgcagcaacaactactt
gatcaacttgctttcctaaaacctatcgatatccaagttttggatgagaatcatggagta
gaattgattatgcagcatttgagttcacttaaaaatgtgcttattgtttttgatggaata
accgaaagaagtcaattagaaatgttagctggcagccccgattggtttggcgcagggagt
cgaatcattattacaaccacaaataaaaatatttttcatcaccctaatttcaaagacaaa
gtgcaagaatataatgtagaattactttctcatgaggctgccttctccctcttttgcaag
cttgcatttggagatcaccctcatacccagaatatggatgatctttgtaatgagatgatc
gaaaaggttggaagactcccattagctttggaaaaaatagctttttcattgtatggtcag
aacatagatgtatgggaacatacattgaagaattttcatcaagtagtttatgataatatt
ttctctgatgtattaaagtcaagttatgaaggattagaagcagagagccaacaaattttc
ctagatttggcatgtttcctcaatggagagaaggtggatagagtgattcaaatacttcaa
ggctttggttatacctcacctcaaactaatttgcaattgttggttgatagatgtcttatt
gatattttagacggacatatacaaatgcacatcttgattctttgtatgggccaagaaatt
gtgcaccgcgagctgggaaattgtcaacaaacaaggatttggcttcgagatgatgctcgt
cgtctatttcatgaaaacaatgaattaaaatatattcgtggaatagtgatggacttagag
gaggaagaagaattggtattgaaggctaaggcatttgcagatatgtctgagctaagaatt
ttacgaatcaacaatgtgcaactttcggaagatattgaatgtctgtcaaataaattgacg
ttgctcaactggcctggctatccttcaaagtatttgccatcaacttttcaaccaccatct
ctgcttgagttacacttgcctggtagtaatgttgaacgactctggaatggaacacagaat
tttaagaacttaaaggagattgatgcaagtgattcgaagtttttggttgaaactcctaat
ttttcagaggctccaaagcttcgacgattgattttacgaaattgtggaagactaaacaag
gttcattcttcaataaatagtctccatcgtctaattttattggacatggaaggttgtgtc
agtttcagaagcttctcatttcctgtcacttgcaaaagtctcaaaactttagttctttcg
aactgtggtctagagttttttccagagtttggatgtgtgatgggatatttgactgaacta
cacattgatgggacttccataaataaactttctccctcaattacaaatctacttggcttg
gttttattgaacctgaggaattgtattagactttctagtcttccaactgaaatttgtagg
ttgagttcacttaaaactctcattctgaatggttgcaaaaacttggacaaaattccacca
tgtttgaggtatgtaaagcatcttgaggagcttgacattggcggaacatccataagcaca
attcctttcttggaaaatctaagaattttgaactgcgaaaggctgaaaagcaatatttgg
cattctttggctggtttggcagcacagtatttaaggtcactcaacgatttaaatttaagt
gattgtaatcttgtggatgaagacattccaaatgatcttgaactcttttcctcattggaa
attctagatctgagcagcaatcattttgaaagactgtcagaaagtattaaacaacttatt
aaccttaaagtattgtacttgaatgattgcaacaagctaaagcaagtacccaagcttcca
aaaagtataaagtatgtgggaggagagaagtccttgggcatgttaagaacttcacaaggc
aaaactgataataagctagtactttctcacaaaactagtttagttggaatggagaatcaa
gtgaagaaagtttgtaatctcctagatttagaacgatccaaggacatactttttgtgggg
atatttggatcaagtggcattggtaaaacaaccattgctgaagttgtttacaacacaatt
atagatgaattccaaagtggttgttttctttacctttcttcaaagcaaaacagtttggtc
ccacttcagcatcaaattctttctcatcttctatcaaaagaaactaaaatttgggacgaa
gatcatggagcacaactgattaagcatcacatgagtaatagaaaagttgttattgttctt
gacggagttgatgaaagaaaccaaattgaaaagttagttggaagtccgaattggtttgca
cccggaagcagagttattattacggctacaaatagagatgttctgcatcaactcaattat
agagatcaagtgcaagaatacaaggtggagttactttcccgcgagagtgcttactcactg
ttttgcaagaatgcatttggagatggcccatctgataaaaatgatctctgcagtgaaatt
gtggaaaaggttggaagacttccattagctttgagaaccattggttcctatttgcataat
aaggacttggatgtatggaatgaaacactgaagagactagatgaagaggaacaaaattac
tttgatacaatattgaagagaaatgtggagaaaatataa
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