Cucumis sativus (cucumber): 101203903
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Entry
101203903 CDS
T02486
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101203903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101203903
03041 Spliceosome [BR:
csv03041
]
101203903
03036 Chromosome and associated proteins [BR:
csv03036
]
101203903
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101203903
Spliceosome [BR:
csv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
101203903
Complex B
101203903
Complex C
U2 SnRNP specific factors
101203903
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
101203903
TFTC complex
101203903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
101203903
NCBI-ProteinID:
XP_004147708
UniProt:
A0A0A0KQ67
LinkDB
All DBs
Position
5:complement(4468210..4473494)
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSGKIQTLLSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKDKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTIVYSICGIDCGFDNPI
FAAIELDYSEADQDSTGVAASEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSAAMHKQKTMFFFLLQ
TEYGDIFKVTLEHNNDSVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHSLYQFQAI
GEDADVESSSATLMETEEGFQPVFFQPRRLKNLMRIDQVESLMPIMDMKIINLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSAAPESLLFLEVLASVGGEDGADHPASLFL
NAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVVLRGRRAILCLSSRPWLGYIH
QGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVFTIERLGETFNETVIPLRYTP
RKFVLQPRRKLLVVIESDQGAFTAEEREAAKKECFEAAGAGENGNGTMDQMENGGDDEDK
DDPLSDEHYGYPKAESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEYGT
LLAVGTAKGLQFFPKRSLVAGYIHIYRFLEDGKSLELLHKTQVEGVPLALAQFQGRLLAG
LGSVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLY
IFADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKL
NGAPNKVEEIIQFHIGDVVTSLQKASLIPGGGECILYGTVMGSLGALHAFTSRDDVDFFS
HLEMHMRQEHPPLCGRDHMGYRSAYFPVKDVIDGDLCEQFPSLPLDMQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttacagtctcactttgcaacgagctaccgggattgtctcggctataaatgga
aatttctccggtggtaaaacgcaggagatagtggttgccagagggaaggtcctggatctc
attcgtcctgatgatagtggtaagatccaaactcttctttctgttgaaatctttggtgcg
attcggtctttagctcaatttaggcttactgggtctcagaaagattatatagttgttggg
tctgattccggtcgaattgttattctggagtataataaggataagaatgtatttgacaag
atacatcaggagacttttgggaagtcgggttgtcgtcgtattgttccggggcaatatttg
gctattgaccctaaaggaagggctgttatgattggagcatgtgagaagcagaagcttgtt
tatgttttgaacagagatacagcagccaggcttactatttcttcaccactggaggctcat
aaatcccataccatagtatattcaatttgtggaattgactgtggatttgacaatcctata
tttgccgcaattgagttggattactcggaggcagatcaggattctacaggggtggcagca
agtgaagcccagaagcatttaactttttatgaacttgatcttggtctcaatcatgtctcc
aggaagtggtcagaacctgttgataatggtgccaatatgcttgttactgttcctggaggt
ggggatggtcctagtggagtgttggtttgtgctgaaaattttgtgatttataaaaatcag
ggacatccagatgttagagctgtcattcctaggcgtgcagatttacctgctgaacgtggt
gtgcttatagtttcagcagcaatgcataagcaaaaaacaatgtttttctttcttttacag
acagagtatggagatatattcaaggttaccttggaacacaacaacgacagtgtcaaagaa
ctgaagataaagtattttgatacaattccagttacagcttcaatgtgcgttctgaaatca
ggatttctatttgctgcctcagaatttggaaaccactcactataccagttccaagccata
ggggaggatgctgatgttgagtcttcctcggctacactgatggaaactgaggaaggtttt
cagccagtttttttccagcctaggagacttaaaaaccttatgagaattgatcaagttgag
agcttaatgcctataatggatatgaaaatcataaatctttttgaggaggaaacacctcag
atttttactctttgtgggcgtggtcctcgatcatctttgcgaatattgagacctggcctg
gccatcagtgaaatggctgtgtcagaacttcctggtgttccaagtgctgtgtggactgtg
aaaaagaacatcaatgatgagtttgatgcatacattgtggtgtcatttgcaaatgcaaca
ctagttctttctattggtgagacagttgaagaagttagtgatagtgggttcctcgacact
accccttcccttgctgtttctttgataggtgatgattctctcatgcaagtccatccaaat
ggtattaggcatattagggaagatgggcgtattaatgaatggagaactccaggcaagagg
accattgttaaggttggttctaataggcttcaagtggtgattgccttaagtgggggagaa
cttatttatttcgaggtggacatgactggtcagttaatggaggtggagaagcatgaaatg
tctggggatgtggcttgcttggacattgccccagtgcctgaaggaaggcaacgttcgcgt
ttcctagcagttggttcttatgataacacaatacgaattctatcattggatcctgatgac
tgtatgcaaattttaagtgtgcaaagtgtttctgcagctcccgaatctcttctgtttcta
gaagttttggcatcagtaggtggggaggatggtgcagatcatcctgctagtctttttctg
aatgctgcattgcattctggggttttattcagaacagtagtggatatggtgacaggccag
ctttctgattcccgatcccgtttcttaggactaagagcacccaaactattttctgttgtt
ttgagggggaggcgtgcaattctttgcctctcaagtagaccttggcttggatatattcat
caaggccattttctattgacccctctatcatatgaaactcttgaatatgcctcatcattt
tcatcagatcagtgtgcagagggtgtagttgctgtggctggaaatttcttgagggttttt
accattgagagattgggagaaacatttaatgaaactgtcattccacttaggtacacccca
agaaagtttgtgcttcaacctaggagaaaactattggttgttattgagagtgatcaggga
gcattcactgcagaagagcgagaagctgctaaaaaagaatgctttgaggctgcaggggct
ggggaaaatggaaatggcacaatggatcaaatggagaatggtggagatgatgaggataag
gatgatcctctatctgatgagcattatggttatccaaaggcagagtctgaaaaatgggtt
tcatgcatccgagttcttgatcctaggtcagccactacaacttgtctgctggagcttcag
gacaatgaagcggcatttagtgtgtgtactgtcaatttccatgacaaggagtatggaacc
cttttagctgttggtactgcaaaggggctgcagtttttccctaaacggagtttagttgct
ggatatattcatatttatcgttttctggaagatggaaaatcccttgagcttttgcacaag
acacaagtggaaggtgttcctcttgctttagctcagttccagggaagattacttgcagga
ctaggatctgtgctcagattatatgatttggggaaaagaagactgcttaggaaatgtgaa
aataagttgttccctaatacaattgtgtctattcaaacatatcgtgatcgaatttatgtt
ggtgacattcaagagtcattccattattgcaagtataggcgggatgagaatcaactatat
atatttgctgatgattctgttcctagatggcttacagcatcatatcatgtggattttgac
accatggctggtgctgataagtttggaaatatctattttgtgcggctaccacaagatgtc
tcagatgagatcgaagaagatccaacaggtggaaagataaaatgggagcagggaaagctt
aatggagctcctaacaaggtagaggagatcatacaatttcacatcggtgacgtggtcaca
tcgttgcaaaaggcatctttgattccagggggtggagaatgcattttgtacggtacagtg
atgggaagcttgggagctttgcatgctttcacctcccgtgacgatgttgatttcttttct
cacttggagatgcatatgaggcaggaacatccacctttatgtggaagagatcatatgggt
tatagatcagcttattttcctgttaaggatgtgatcgatggggatctgtgtgagcagttc
ccatcccttcccttagatatgcagagaaagattgccgacgaactggaccgtactccagga
gaaatactgaagaaacttgaagaagtacgaaataagattatttaa
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