Cucumis sativus (cucumber): 101203916
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Entry
101203916 CDS
T02486
Name
(RefSeq) RING-H2 finger protein ATL43
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101203916
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101203916
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101203916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_1
CR_prot_dom_plant
Prok-RING_4
zf-RING_16
zf-RING-like
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
101203916
NCBI-ProteinID:
XP_031738385
LinkDB
All DBs
Position
1:complement(19112603..19114427)
Genome browser
AA seq
391 aa
AA seq
DB search
MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI
PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT
MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK
HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS
KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC
FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD
SRRFSVASLPVELKRQRRMGMMGKHAGKGTG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccttcccaattccttctccctcttctctctctttttcctcttcaccgccgtc
tctccggcagcccccaccacctaccaccgacctctaaaccttatcctaacccacccttta
aaggaaactgtttttcttgcttcttcttcttcttctcctcccccaccacctctgtttatt
ccctctgctccaccccccgaggagaagccggtctactctccattccggccgagcatggcg
gtggtggtgggtgtcctgaccaccactttctccattactttccttcttcttttatacgcc
aagcactgcaagcgtgggaatgcggcggtggtggtcggttactcgatgcgtcccaatacg
atgatgggtgttccgagcttctcgacgaggaagaactctggcatcgaccagactgttatc
gaatcgttaccgattttccgatttgggtcgttgagtggacagaaggaaggcctggaatgc
gctgtttgtttgaacagattcgagccgacggaggttctgagacttcttccgaaatgcaaa
cacgctttccatgttgaatgtgtcgatacttggctcgacgctcactccacttgccctctc
tgtcgctacagagtcgacccggaggacgtgttattagttgaagacgtcaatatctttctt
cacgaccaaccacctccaccacctcagccgccgccgccgccaccacgggaatcgaattcc
aaggatgtagtgttgaacttagaacaggggagaagaagcggcaaggctggatccgggaga
gtctccggtagacactcgtcagtgggcgagaagagaacaggggagtccagttaccgtgat
ccagcattgttgagacggtcactcgacagcaagagaaccgaaacggtgtctgttgggtgc
ttcgatcggcaccgaaaagacgggttacttttgccggaggagaaaacaaatcaaaatcag
aatcagaacagattggagcacaggatcatagtgtcgccgaaggtgccggtggtggagaga
tggagcgatgtccaaggttcggatctgttgtatctacggtcagaaatgataatatccgac
agccggagattttcagtagcttcattaccagtagaattaaagagacagcgacggatgggg
atgatggggaagcatgccggaaaagggaccggatga
DBGET
integrated database retrieval system