Cucumis sativus (cucumber): 101203948
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Entry
101203948 CDS
T02486
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101203948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101203948
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
101203948
SWR1 complex
101203948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
101203948
NCBI-ProteinID:
XP_011652096
LinkDB
All DBs
Position
3:complement(31979602..31994703)
Genome browser
AA seq
2120 aa
AA seq
DB search
MTSKGPRSKLDHESRAKRQKALEASKEPNRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKLVLYKHRTELD
EKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPSQVNSTNEPHNAHVQEIDESKAVEP
TELNVEHESDSVDFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPL
EELLKRYSGEKDDLEVSPETSTGGAEETEVEDHGKWNECSTSRKVHEIGSLTFTGRRCNE
SNGESSNIENHTKRETRETKNLSTLPVAFPKDDVFYDFTEEREDGDYDFTGGEDKDDETT
LSEEEKLDKVESNNGKDEILMLQNESEIPIEELLARYGKDHYNDYDSDYDTEDTSACSDD
LTNSPSHEEIEPTGLDVSVHKNVDPGKSHSSASSPPEGKGSLENFEGRESEDGIFDAAAA
ERSVQPSGNTFPTTTVRSKSPCLDSPSHEGIEPVRLDFCVDDNIDPNKCHSASSPPERKG
SFENSGETESEDRIFDAAAAARSAQPTGNTFSTTKVRTKFPFLLKHSLREYQHIGLDWLV
TMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWC
PAFKILTYFGSAKERKVKRQGWMKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHL
IKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNP
ISGMVEGQEKVNKEVLDRLHNVLRPFILRRLKRDVEKQLPKKYEHVINCRLSRRQRQLYE
DYIASSETQATLASGNFFSMINVIMQLRKVCNHPDLFEGRPIISSFDMAGIVMQLSSSVC
SALSPGLFSRVDLKGLGFLFTHLDFSMTSWEVDEVRAIATPSSLIKGSTSVNKSEEIGSG
FRYRKRLHGSSIFADIQNAIMEERVRQAMERAEAMAWWNSLRCDKKPIYSTSLRELVTIR
HPVYDICHEKSDPSSYCYSSKIADIVLSPVERFQMMMGLVESFTFAIPAARAPAPLCWYS
RSCSDVFLDPSYEQNCSRFLFPLLTPIRSAIIRRQVYFPDRRLIQFDCGKLQELAILLRK
LKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLF
ILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEE
NILKKANQKRALDNLVIQSGSYNTEFFQKLDPMELFSGHRSLAIKNMQKEKNQCTNANEV
SVSNADVEAALKIVEDEADYMALKKVEEEEAVDNQEFTEEVIGRMEDDEFMNDDEMKLDE
GGDQVNGMIISNKDNEAIIHGANDLNEERAVIVASKEDDVDMLADVKQMAAGAAATGQTI
SSIDDRLRPIDRYAIRFLELWDPVHDKAAVESDVQFEETEWELDRLEKYKEEMEAEIDED
EEPLVYESWDAEFATEAYRQQVEALAQNQLMEDLEFEAKRKEAEEAENCDPTRNETHSEL
KPKAKKKSKKAKFKSLKKASLSSELKAVKKEASVEFLSTDDEDICSEDVLESLSAQSSLQ
KKRKKAELSLDSESGKSLKKKSKKLKKNIVDTFPQDHPNVSGVQYDEAMEVKPRENGVDL
EHKVVGRNRMGGKISITSMPVKRVLTIKPEKLKKGNIWSRDCVPSPDFWLPQEDAILCAM
VHEYGTHWSMISSTLYSMTAGGFYRGRYRHPVHCCERYRELVQRYVISAPDNPNSEKITN
ASSGKALLKITEENIRVLLDLAAEQPDREYLLQKHFTALLSTVWKARIRGNRLDSSLSWN
GFYSGARYFSTGNHITRYFGRETTGKLKFGNTGHNFKLLAAALNDVCSTRMDDKKPQSYH
GERASVTTEQLELTLEFQGENDLNVPFPSSVDLIVSDSVYLPLVNLDTCESSGARKRTKV
AETRFRDAARACKEDFHGWASSVFPIIDLKSRSVSKSQSLGKHKLGVADSSKSAKSKHRK
MGPDHGESSHHPIADHQMPSLVQEDNHNLYSLSSPILTDYSFPFGMDEYPFPHEEPGSRE
MIPHDYIPGLISGLDIPEEI
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaaaggccccaggtctaaacttgatcatgagtcaagagctaagcgccaaaag
gcacttgaagcttcaaaagaacccaatcgacctaaaacacattgggatcatgttttagaa
gagatggtctggctatcaaaggactttgagtctgagcggaaatggaaattagctcaggca
aaaagggttgctctaagagctagcaaaggcatggtagatcaagctacaagggaagaaagg
aagttgaaggaggaggagcaacgattgagaaaacttgctctcaatatctcaaaggatgta
aagaagttttggatgaaaatagaaaagctggtgctttacaaacatcgaactgagcttgac
gagaaaaagaaaaaggctcttgacaaacatctcgagtttcttctagggcaaacagaaagg
tactcgacaatgctggcagaaaatcttgtggaaacttataaaccatcgcaggtgaattct
acaaatgagccacacaatgctcacgtccaagagattgatgaaagcaaggctgttgaacct
acagagttaaatgttgaacacgagtcagattctgtggactttgatgaagaattcgatgta
cactctgaagatgaatctgaagataatgagcagaccatagatgaagatgaagctttaata
actaaagaagaaaggcaagaagaattggaagctttgcaaaatgaagtggatcttcctctt
gaagagcttcttaaaagatatagtggagagaaagatgatttagaagttagccctgaaaca
agtactggaggagcggaagagacagaagtagaagatcatggaaaatggaatgagtgttct
acatcacgtaaggttcatgaaattggctcacttactttcactggtcgtcgttgtaacgaa
agcaatggggaatcgtcaaatatagaaaaccatacaaagagagagactcgtgaaacaaaa
aatttgtccacgctacccgtggcttttcccaaggacgatgtattttatgattttactgaa
gaacgtgaagatggtgactatgattttactggtggagaagataaggatgatgaaacgact
ttatctgaggaggagaaattggacaaagtggaatcaaataatggcaaggatgagatttta
atgctacagaatgagagtgaaatacctatagaagaactgcttgcaaggtatggaaaggat
cactacaacgactatgattcagattatgacactgaagatacttctgcttgttcagacgac
cttacgaattctccatctcatgaagaaattgagccaacgggccttgatgtctctgtgcac
aaaaatgttgaccctggtaaatctcattcgtctgcaagttcacctccagaggggaaagga
tccttagaaaattttgaaggaagggaaagtgaggatggaatttttgatgctgcagctgca
gaaagatctgtacaaccgtctgggaacacatttcccacaactacagtgcgttcaaaatcc
ccttgcctggattctccatctcatgaaggaattgagccagtgcgccttgatttctgtgtg
gacgataatattgaccccaataaatgtcactctgcaagctcacctcctgaaaggaaagga
tccttcgaaaattctggagaaacggagagtgaggacagaattttcgatgctgcagctgca
gcaagatctgcacaaccaactgggaacacattctccacaactaaagtgcgaacaaaattc
cctttccttcttaagcactccttgcgtgaatatcagcatattggcttggattggcttgtg
acaatgtatgagaaaagactaaatgggattcttgctgatgagatggggcttgggaagaca
atcatgaccattgctttgcttgctcatcttgcttgtgaaaagggaatatggggcccccat
cttatcgtggtcccaacgagtgtcatgcttaattgggagactgagtttctcaaatggtgt
cctgcttttaaaattttaacttactttggaagcgcaaaagagcgaaaggttaagaggcaa
gggtggatgaaaccaaactcatttcatgtatgcataaccacttacaggttggttatccaa
gattctaaagttttcaaacgcaaaaagtggaagtatctaatactagatgaagctcatcta
attaaaaactggaagtcacaaagatggcaaactctcttgaacttcaattccaaacgacga
attttattaactggtaccccccttcaaaatgatctgatggagctttggtccttgatgcac
tttttgatgccccatatttttcaatctcatcaggaattcaaggattggttttgcaatcca
atttctggaatggtagaggggcaagaaaaagtgaataaggaagttcttgatcgtctgcac
aatgttctgcgcccctttatacttcgtcgactgaaaagagatgtagagaagcagctgcca
aagaaatatgagcatgtcataaactgtagattgtcaagaaggcaacgtcaattatatgag
gactatattgctagttcagaaacacaagctactcttgccagtggcaatttctttagtatg
attaatgttattatgcaacttagaaaagtttgtaatcatcctgatttgtttgagggtcgt
ccaatcatcagttcttttgatatggcgggtatagtcatgcagttgagttcatctgtatgt
tctgcgttatcacctggcctgttttctagagttgaccttaagggtttaggatttttattc
actcatctagactttagcatgacttcatgggaggtagatgaagtgagagctattgctact
ccatcaagtttaattaagggttctaccagtgtgaataaatccgaggaaattggatctgga
tttagatatcggaagagattgcatggatcaagtatttttgcagacatccaaaatgcaatt
atggaggaaagagtaaggcaggcaatggaacgagctgaagctatggcatggtggaattcc
ttgagatgtgacaaaaagccaatttattccacatcccttagggagttggtgacaattagg
catccggtttatgacatatgccatgagaagtcggatccctcgtcttattgttattcctca
aaaattgctgacattgtcctttcaccagtagaacgtttccagatgatgatgggcttagtt
gaaagcttcacctttgcaattccagcagcaagggccccagcacctctgtgctggtatagt
agaagctgttctgatgtgtttctggatccatcttatgagcaaaactgctcccgattcctg
tttccccttttaactccaatccggtctgcaattattcgaagacaagtgtatttcccagac
agaaggctaatacaatttgactgcggcaaattgcaggaacttgctattctacttaggaaa
ctaaaatctgaaggtcaccgagcattaatattcactcaaatgacaaaaatgcttgatatc
ttggaggcattcatcaatctgtatggttacacttacatgcgtctggatggatccactcag
cctgaagagagacagacattaatgcaacgatttaacaccaaccctaaaatttttcttttc
attttatcgactcgcagtgggggtgtaggtatcaatcttgttggtgcagacactgttatc
ttttacgacagtgattggaaccctgctatggatcaacaagctcaagatcgctgtcaccgc
ataggacagacaagggaagttcatatatatcgtctgattagtgaaagcaccattgaagag
aatattttaaagaaggcaaatcagaagcgtgctcttgataatcttgtcatccaaagtggt
agttataacactgaatttttccagaagcttgatcccatggagttgttctccggtcacagg
tctcttgccattaaaaatatgcaaaaagaaaagaatcagtgcaccaatgcgaatgaggtt
tctgtatctaatgcagacgtggaggctgctttaaagattgtagaagatgaagctgattat
atggctttgaagaaagttgaagaagaagaagctgtggataatcaggaatttacagaagaa
gtgattgggaggatggaagatgatgagtttatgaatgatgatgaaatgaagcttgatgaa
ggtggggatcaagttaatggcatgattatatccaacaaagataatgaggcaataatacac
ggagctaatgatcttaatgaagagagagctgtaattgtagctagcaaagaagatgatgtt
gacatgctggcggatgtcaagcaaatggcggctggagctgctgcaactggacaaaccatc
tcgtccattgatgaccgactacgtccaattgatcggtatgcaatacgttttctggaactg
tgggaccctgtacatgacaaagcggctgtggagtctgatgtccagtttgaagaaacagaa
tgggaactggatcgtcttgagaagtataaagaggagatggaagctgagattgatgaagac
gaggaacctcttgtatatgaaagctgggatgctgaatttgcaactgaagcatatagacag
caagttgaggccttggcacaaaatcagttgatggaggatttggaatttgaagccaagcgg
aaagaagcagaggaggctgaaaattgtgatcctacaaggaatgaaacacatagtgaatta
aaaccaaaggctaaaaagaaatcaaagaaagccaagttcaaatctctgaagaaggcctct
ctttcttccgagctaaaagcagtgaaaaaagaagcatcagtggaattcttgtctacagac
gatgaagatatatgcagtgaagatgttcttgaatctttatcagcacagtcaagcttacag
aaaaaacgtaaaaaggctgagcttagtctggacagcgagtcaggcaagtccctgaagaag
aaatctaaaaaattgaagaaaaatattgtggatactttcccacaagatcatcctaatgtg
tcaggtgtgcaatatgatgaagccatggaagtaaaaccacgggagaacggtgttgatctt
gaacataaagtagttggccgtaatagaatgggagggaaaatatctattacttccatgcca
gttaagcgtgttttgacaataaaaccagagaaacttaaaaaggggaatatttggtcaagg
gattgtgttccttcccctgacttttggttgccacaagaggatgcaatactgtgtgctatg
gtacatgaatatggtacacactggagcatgattagttcaactttatacagtatgactgct
ggtgggttttatagaggcagataccgtcatcctgttcattgctgcgaaaggtatagggaa
ctcgtacaaaggtatgttatatctgctccagataatccaaatagtgagaagatcacaaat
gctagctctgggaaagctcttctcaaaatcacggaggaaaatattcgagtactgttagat
ttagctgctgagcagcctgatagagagtacttacttcagaagcacttcactgcgctgctc
tcaactgtgtggaaggctagaatacgtggcaaccgtttagattcttcactttcttggaat
ggtttctattctggtgcaaggtatttttcaaccggtaaccacattactcggtattttggg
agggaaacaacaggtaagttgaaatttggcaacacaggacacaacttcaagttactagct
gctgcacttaatgatgtttgttctacaaggatggatgataagaagccccaatcctaccat
ggggaacgagcatcagtcactacagagcagttggagttaacacttgagttccagggagag
aatgatcttaacgtgccatttccatcttcggttgacttgatagtatctgattcagtttac
ttgcccttggtcaacctggatacatgtgaatcttctggcgctcgaaagcgaacaaaagtt
gcagagacacgtttcagggatgctgcaagagcttgcaaagaagatttccacggatgggct
tcctctgtttttccaataatcgatctcaagtctcgctctgtttcaaagtcacagtcactg
ggaaagcataagctgggagtcgccgactcttctaaatctgcaaaatctaagcataggaag
atgggaccggaccatggagaaagctcccaccacccgattgccgaccatcagatgccatca
cttgtccaggaagataaccataacttatattccctcagttcaccaattcttacagattat
tcatttccatttggcatggatgagtatccattcccacatgaagagccagggagtcgagag
atgattcctcatgattatatcccaggattgatttcaggtctcgacatacccgaagaaatt
tga
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