Cucumis sativus (cucumber): 101204016
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Entry
101204016 CDS
T02486
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101204016
09122 Translation
03015 mRNA surveillance pathway
101204016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101204016
Spliceosome [BR:
csv03041
]
Complex A
Other components
Complex A specific factors
101204016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
101204016
NCBI-ProteinID:
XP_011658817
UniProt:
A0A0A0LYC4
LinkDB
All DBs
Position
1:22486253..22491050
Genome browser
AA seq
491 aa
AA seq
DB search
MSGMYDQGGDAAPSYGAPGGGGGYGGGGGGGGYGGGGGAGYGGKGGDGGYGGGGRGGGGG
GGGGRGYGGRGGGGGYGGRGGGGGYQGGDRGGGYQGGDRGGRGAGRGGGGGRGGSGRDGD
WVCPNPGCGNLNFARRVECNKCGAPSPGGASDRSGGGGGGGGYNRGGGDSGYGGSRNGRG
GSFHGGRSGTHDGGRNEGGSRGGNSYGGHQGGEDSGYGQVPPSSAPSSGGLAGSYPPSYH
GGSSDYGTDAVPPPASYSGTTYPPTYGGPTGGYGGDSLGDGRGAAARGGPSAGYDGGYNA
GGRGGYNAGGRGGSYNASGGRAGGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPD
VTTDELRELFGGIGQIGRIKQKRGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSA
GGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYGGGGDRRRDSYRDGGSGPDR
HQHGGNRSRPY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtatgtacgatcaaggaggagacgctgctccgtcttacggagcccctggaggc
ggtggaggatacggtggcggaggtggaggcggtggatacggaggcggtggtggtgcaggc
tatggagggaagggcggtgatggtggatatggaggcggaggccgtggaggcggcggcggc
ggcggcggtggtagaggatatggaggacgaggtggcggcggaggctatggtggtcgtggc
ggcggtggcggatatcaaggaggagatcgcggaggcggatatcaaggaggagatcgagga
ggacgaggcgctggacgtggtggcgggggtggtcgtggcggaagcggcagagatggggat
tgggtctgccctaatcctggctgtggaaatttgaactttgctagaagagtagagtgtaac
aagtgtggtgcaccctcacccggtggtgctagtgatcgaagtggtggtggtggtggtggt
ggtggttataatagaggtggaggtgacagtggctatggtggcagtcgtaatggcagaggt
ggtagtttccacggtggtagaagtggaactcatgatggaggtcgaaatgaaggagggagc
agaggtggtaattcttatggtggtcaccagggaggagaagatagcgggtacggtcaagtt
cccccatcctcagcaccgtcatctggtggtcttgctggctcttatccaccatcttaccat
ggtggaagttcagattacgggactgatgcggttcctcctcccgcaagctatagtggaaca
acataccctccaacttatggtggtcccacaggtggctatggtggtgacagtttaggtgat
gggcgtggtgctgctgctcggggtgggccatcagctggatatgatgggggctacaatgcg
ggtggtagaggtggctataatgctggtggtagaggaggaagctataatgcgagtggtggt
agagctggtggttatggaagtacaccggcagcagagccagcacaggttaaacagtgtgat
gataattgcgacgattcatgtgataactctagaatctatgtatccaatttgccaccagat
gtgaccactgatgaattgagagaattatttggtggaattggtcaaattggaagaatcaag
cagaagaggggctacaaggatcaatggccttggaacataaaaatatatacagatgagatg
ggaaataacaaaggcgatgcatgtgtatcatatgaggacccctcagcagcgcattctgct
ggcggtttctataacaattatgatttgagaggttatagcatcaatgttgcaatggctgag
aagtctgcaccgagggctccacctgcatataaccatggtggtggtggtagaggtggatat
ggaggtggtggagataggcgcagagatagctacagggacggaggctctggacctgataga
catcagcatggtggaaatcgatcacgtccttactga
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