KEGG   Cucumis sativus (cucumber): 101204052
Entry
101204052         CDS       T02486                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csv03036]
    101204052
   03400 DNA repair and recombination proteins [BR:csv03400]
    101204052
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101204052
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101204052
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 101204052
NCBI-ProteinID: XP_004141784
UniProt: A0A0A0K7A1
LinkDB
Position
7:22277009..22295421
AA seq 1147 aa
MAELCKLTHYVESFVDVSRTPSQQATSLETITSLVKNNVLTIETLVREMGMYLTITDNII
RGRGILLLGELLACLASKPLDSATIHSLIAFFTERLADWKALRGALVGCLALMRRKTNVG
SISQNDAKSVAQSYFQNLQVQSLGQHDRKLSFELLACLLEHYPDAVVSLGDDLVYGICEA
IDGEKDPHCLLLTFRIVELVAKLFPDPTGALASSSSDLFEFLGCYFPIHFTHGKEEDIDV
RRNDLSHALMRAFSSTPLFEPFAIPLLLEKLSSSLPLAKIDSLKYLSDCTVKYGADRMKK
HSEAIWSSVKEIIFTSIGQPNLSINTESLNSPSFQENEMTTEALRLLQKMVVASNGLFLT
LIINDEDVKDIFNILNIYTCYKDFPLQSRQRLNAVGHILYTSASASVASCDHVFESYFHR
LLDFMGISVDQYHNDKISPIRNLNFGALYLCIEVIAACRNLIVSSDENTCSVKEKSYSML
QIFSCSVVQLLSSTFSGIVKRDLHDAEFYCAVKGLLNLSTFPVGSSPVSRVIFEDILLEF
MSFITVNFKFGSLWNHALKALQHIGSFVDKYPGSVESQSYMHIVVEKIALMFSPHDEVLP
LMLKLEMAVDIGRTGRSYMLKIVGGIEETIFYNLSEVYVYGNSKSVEIVLSLLDCYSTKI
LPWFDEAGDFEEVILRFALNIWDQIEKCSTFSTSMDKCIQVLLDATMMALKLSVRSCSKE
SQNIIVQKAFNVLLTSSFSPLKVTLSNTIPVQMEGLQFLQQKDNPTSRDEWILSLFASVT
IALRPQVHVPDVRLIIRLLMLSTTRGCVPAAQALGSMINKLSVKSDKVEVSSYVSLEEAI
DIIFKTEFRCLHNESTGDGSEMFLTDLCSSIEKSSLLQVHAVVGLSWIGKGLLLCGHDKV
RDITMVFLQLLVSKSRTDASPLQQFKLEKDNETSLDFAVMKGAAEAFHILMSDSEACLNR
KFHAIVRPLYKQRFFSTMMPIFQTLVSKSDTSLSRYMLYQAYAHVISDTPLTAILSDAKK
FIPMLLDGLLTLSVNGINKDVVYSLLLVLSGILMDKNGQEAVTENAHKIVDCLAGLTDFS
HMMLVRETAIQCLVAVSELPHARIYPMRRQVLHVISKALDDPKRSVRQEAVRCRQAWASI
ASRSLHF
NT seq 3444 nt   +upstreamnt  +downstreamnt
atggcggagctctgtaagcttacacactacgtcgagtccttcgtcgatgtatctcgtaca
ccctctcaacaggccacaagcttggaaacgatcacctcccttgtgaagaacaatgtacta
acaatagaaacactggttagagaaatggggatgtatttgacaattactgataacattatt
cgaggcagaggcatacttcttcttggggaactacttgcatgtctagcatcaaagcctctg
gatagtgcaacaattcacagcctaattgccttcttcacagagagactggcagattggaaa
gctttacgaggtgcccttgttggctgcttggcactaatgaggaggaaaacaaatgttggg
tcaatttctcagaatgatgcaaagtcagttgcacagtcttattttcaaaatcttcaagta
cagtccctgggacagcatgatcgaaagctgagttttgaacttctggcgtgtcttttggaa
cattatcctgatgcagttgtttcactgggtgatgatcttgtgtatggaatctgtgaagcc
attgatggtgaaaaagatccacactgcttactgcttacttttcgcatcgttgagcttgtg
gcaaaactattcccagatccaactggagcacttgcaagtagttctagcgatctttttgaa
ttcctgggttgctatttcccaatccattttacacatggaaaagaggaggacatagatgta
agaaggaatgatctttcgcatgcacttatgagggccttctcatctacccccctctttgag
ccatttgccattcctttgcttcttgagaaactttcatcttcattgccattagcaaagatt
gattctttgaagtatctaagtgattgcactgtcaaatatggggcagatagaatgaaaaag
catagtgaagctatctggtcttcagtaaaggagatcatatttacttcaataggacagccg
aatttgtccattaacacagaatcattaaatagtccaagctttcaagagaatgaaatgaca
acagaagcactaagactcctgcagaagatggttgttgcgagcaatgggttatttttaaca
ttaattatcaatgatgaagacgtaaaggatattttcaatatcctaaatatttatacatgt
tacaaggactttcctttgcaaagcaggcagagactaaatgcagtgggccatatcctttac
acgtcagcaagtgcatctgttgcttcctgcgatcatgtgtttgaaagttacttccatcgt
ttgctggattttatggggatttctgtggatcagtatcataatgataaaatttctcccata
aggaatttaaactttggagccctctatctctgtattgaagttattgcagcttgcagaaac
ttgattgtaagctctgatgaaaacacatgctccgttaaagagaaatcatactccatgctt
caaattttttcatgttcagtggttcagctcctcagctctaccttttcaggaattgttaaa
cgagatctgcatgatgctgaattctactgtgcagtaaagggcttgctgaatctgtccaca
ttcccggtaggctcttcaccagtatccagagtcatatttgaggatattttgttggagttc
atgtcatttataacagtgaacttcaaatttggatcgttgtggaatcatgccttgaaggca
ctacagcatattggttcatttgttgacaaatatcctgggtctgtggaatcacaaagttac
atgcatatagtcgttgaaaagattgcattgatgttctctcctcatgatgaggtcttgcca
ctgatgcttaaacttgagatggcagttgacattggtagaactgggcgcagttatatgctg
aaaattgttggggggattgaagagacaatattctacaatttatctgaggtttatgtctat
ggcaattcaaaatcagtcgagattgtattgtccctgttggattgctactcgaccaaaatt
cttccatggtttgatgaagctggagattttgaggaagtcatactgcgatttgcactgaac
atttgggatcaaattgaaaaatgttcaacttttagcacttcgatggataaatgtatccag
gtgcttcttgatgctaccatgatggcattgaaactctcagttcgaagttgctcaaaggag
agccagaatattatagtccaaaaggcattcaatgtattattaacaagcagtttttctcct
ttaaaagtgacattatctaatacaataccagttcagatggagggcttgcaatttctgcag
cagaaagataatcctacttctagagatgaatggattctttcattatttgcatcagtcact
atagcacttcgcccacaagtacatgttccagacgtgagattaataattcgtttgcttatg
ttatccaccaccaggggctgtgtaccagctgcacaggcactgggttctatgatcaataaa
ttgagtgtgaaatctgataaagtagaagtctcaagttatgtttccttggaagaagctatt
gacattattttcaaaacagaatttaggtgcctccataatgaaagtactggtgatggcagt
gaaatgtttctcactgatttatgctctagcattgaaaaaagctctttgcttcaagttcat
gctgtggttggattatcatggattggaaaaggtttgctcctttgtggtcatgataaggtc
cgagatataaccatggttttcttgcagctcttagtgtcaaaaagcagaacagatgcctca
cccttgcagcagtttaaactggaaaaagataacgaaacaagcttagactttgcagtcatg
aaaggtgcagcagaggcatttcacattcttatgagtgattctgaggcttgtttgaaccga
aagttccatgcaatagtacgaccactttataagcagcgttttttctctaccatgatgcct
attttccagactctagtaagcaaatcagatacgtcactttctagatatatgttgtaccag
gcatatgcacatgttatatctgatactccactcactgctatattgagtgatgcaaagaag
tttattcctatgcttttggatgggttgttaacattaagtgtgaacggcataaataaggat
gtggtttatagcctcctccttgttttatctgggatattgatggataaaaatggacaggaa
gctgtaacagagaatgcacataaaattgttgattgcctagctggacttactgacttttct
catatgatgctcgtacgagaaactgcaattcagtgccttgtcgctgtgtctgaactgccc
catgcaaggatataccccatgagaagacaggtactgcacgtaatatctaaagctcttgat
gatccaaaaagatctgttcgacaggaagctgtcagatgtcgacaagcatgggcatcgatt
gcatcaagaagtcttcatttctaa

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