Cucumis sativus (cucumber): 101204146
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Entry
101204146 CDS
T02486
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101204146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101204146
Spliceosome [BR:
csv03041
]
Complex C
Other components
Step II factors
101204146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
LAGLIDADG_2
Motif
Other DBs
NCBI-GeneID:
101204146
NCBI-ProteinID:
XP_004146980
UniProt:
A0A0A0K7C9
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Position
7:complement(17644460..17648495)
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AA seq
420 aa
AA seq
DB search
MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA
AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctcaagcaagagcttctaaagaaacgtcaagccctagccaccgaaaccggc
ggcaagcgcgttttcaagcgatccgaaatcgaacagaggcaaatccaacagctacgcgag
aaagagaagcgcgaattggaagctaaagctctccgccaatccaccacatccgctaccgcc
gcggaggccgtctccacatcttctaaatccaatccattagcttcagcctctaccacttcc
tcctccgtcgcaaccaactctaccaccaccacttcaaagtccctaaccgacgagcagaat
atcgacaacctcgtccttcccagacaggaagtgattcgaagactccggtttctgaaacaa
cccattacgcttttcggggaagatgatgatgctcggcttgaccgtttgaagttcgtgctg
aaagcggggcttttcgaggtggatagtgatttgacggaggggcaaacgaatgactttctt
cgggatattgcagagttgaggaagcggcagaagacggggattttgagcgagaggaagagg
cagaagaaggaggatggtgctggggaagagggagatggaggtggggctgatgaagaaagt
gccgatggagggtcgagtggggttgaaactgacaaagatttaaagagaatgaaagctaat
tttgatgagttatgtgaggaagataagatattggtgttttttaagaggttgttaaacgag
tggaagcaggaattggatgaaatgcctgaagcagagaagcggacggccaaagggaagtct
atggtagcaacatttaagcaatgtgctcgttatttacatcctctcttcaagttttgcagg
aagaaggttcttcccgatgatattcggcaagcattgttggtagttgttgaatgctgcatg
aagcgagactatctagctgccatggatcaatacattaagatggccataggaaatgcccca
tggcctattggtgtcactatggttggtattcacgaacgttcagctcgtgagaagatttac
accaacagtgtggctcatatcatgaatgatgaaacaacaaggaaatacttgcaatcaatc
aagagattgatgacgttctgtcaacggcgctatccaacgatgccatccaaggcagtagaa
tttaacagcttggcgaacggtagcgacctgcaatctctgctagcagaagagagagtttct
ggaggaggcaagctgggttctgatgagaggctacgaatcatgcctgccccagaagatagc
tag
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