Cucumis sativus (cucumber): 101204161
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Entry
101204161 CDS
T02486
Name
(RefSeq) coatomer subunit alpha-1 isoform X1
KO
K05236
coatomer subunit alpha
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101204161
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101204161
Membrane trafficking [BR:
csv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101204161
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101204161
Exosomal proteins of bladder cancer cells
101204161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
101204161
NCBI-ProteinID:
XP_031736336
LinkDB
All DBs
Position
2:12630552..12636410
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AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCAAFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRYYEFSTQKDSQVIPIRRPG
STSLNQSPRTLSFSPTENTILICSDLDGGCYEFYTIPKDSFGRSDSLQDAKRGLGGSAVF
VARNRFAVLDKSHNQVLLKSLKNEVVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQ
QRIILGDLQTPFVRYVCWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDGGIIRTLDVPIYITKVSGNTLFCLDRDGTVRSFIIDATEYI
FKLSLLKKRFDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYVTASTHGLHDVAERLAAEL
GDDIPSLPEGKTASLLLPPTPVMCGGDWPLLRVMKGIFEGGLDNVGPGRADDDDDEVADG
DWGEELDVVDVDGLQNGDVTAILEDEEGAEENEEEGGWDLEDLELPPEADTPKVSVSSRN
SVFVAPTPGIPANQVWTQRSSLAAEHAAAGNFDTAMRLLNRQLGIRNFAPLRPIFLDLHA
GSQTYLRAFSSAPIISLAVERGFSESSNANAKGSPALIYSFSQLEEKLKAGYKATTTGKF
SDALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQME
LAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLASAANFARRLLETNPSIENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVLSQEGQLCSVCD
LAVIGADASGLLCSPTQNR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagtttgaaaccaagagtaatagagtcaaagggttgagtttccacactaag
aggccatggatccttgcaagtcttcacagcggagtgatccagctatgggattaccggatg
ggcacgcttattgatagatttgatgagcatgaggggcctgttcgtggtgttcattttcac
aagtctcagcctctttttgtgtctggaggggatgattataagattaaagtttggaactat
aagacacataggtgtctatttactcttcttggacaccttgattatatacgtactgtgcaa
tttcatcatgagtatccatggatcgtgagtgctagtgatgatcagactattcgtatatgg
aactggcagtcacgtacatgtatctctgtgttgacgggccacaatcactatgtgatgtgt
gctgcattccaccctaaggaagatcttgttgtgtcagcttccctagatcagaccgttcgt
gtatgggacattggtgccttgaggaaaaagactgtatctccagcagatgatgtcttgcgg
ttgagtcaaatgaatgctgatctatttggtggagttgatgctgttgttaaatatgtcttg
gaaggtcatgatcgaggggttaattgggcggcattccatccaactctgccattgattgtg
tcaggggctgatgatcgacaggtgaaattgtggcgaatgaacgacacaaaagcgtgggag
gtggacacactaagggggcacatgaataatgtttcttgtgtgatgttccatgccaaacaa
gatataatcgtttcaaattctgaggacaaaagcattcgtatttgggatgctacaaagcga
actggacttcagacatttcggagggagcatgatagattttggattcttgctgctcatcct
gagatgaatttgttggcagctgggcatgacagtggcatgattgtctttaagttggagaga
gaaagaccggcctttgctattagtggtgactctctattttatgtgaaggaccgctttttg
cgctattatgagttttccactcaaaaagattcacaggtcatcccgattcgaaggcctggt
tccactagcttgaatcagagcccaaggaccctttcatttagccctacagaaaacacaatt
cttatttgctcagatctggatggtgggtgttatgagttttacacaatacctaaggatagc
tttggtagaagtgatagcctccaagatgcgaagagaggacttggaggatcagcagtgttt
gtggctcgaaataggtttgccgtgcttgataaaagtcacaaccaagtcttgttaaaaagc
cttaagaacgaagttgttaagaaggtccctattcccatcactgcagatgcaatattttat
gctggaactggcaatttattgtgccgagcagaggatagagttgttatatatgatcttcag
cagagaattattctgggtgaccttcaaaccccttttgttaggtacgtttgttggtccaat
gacatggagagtgttgcattgcttagcaaacatgcaattattattgctaacaaaaagctt
gttcaccaatgcacgcttcatgagacaattcgtgtaaagagtggagcatgggatgataat
ggagtttttatctatacaaccctaaaccacattaagtattgcctccccaatggagatggt
ggtataatcagaactctcgatgttccaatatatatcacaaaggtttctggcaatacactt
ttttgcttggatagggacggaacagtgcggtcattcattattgatgcaacagagtacata
ttcaaactctctctcttgaagaagagatttgaccatgtcatgagcatgataaggaactca
cagctctgtgggcaagcaatgattgcatatttgcaacaaaagggatttccagaagttgca
cttcacttcgtgaaggatgagagaaccaggttcaatttggctcttgagagtggaaacatt
cagattgcagttgcgtctgctacagcaattgatgaaaaagatcattggtataggctgggt
gtggaggctcttcgtcaaggcaatgcaggcatcgtcgaatacgcctaccagaagacaaaa
aattttgagaggttatcgttcctttatctcataactggcaacacagcaaaactatcgaag
atgttaaagatcgctgaagttaagaatgatgtcatgggtcagtttcataatgctctatat
cttggtgatgttcgtgagcgcgtaaaaatcctggagaatgttggccacttacctcttgca
tacgtcacagcttctacccatggtttacatgatgtagctgaaaggctagctgctgaactg
ggagatgacattccatctttaccagaaggcaagactgcatccctccttttgcctcctact
cctgtcatgtgcggtggtgattggccacttctgagggtcatgaaaggaatatttgagggt
gggctggataatgtgggtcctggtcgtgctgacgatgatgacgatgaggttgcagatggt
gattggggtgaggagctggatgtggttgatgttgatggcttacaaaatggggatgtgaca
gcaattttggaggatgaggaaggtgcagaagaaaatgaggaagaagggggatgggacctt
gaagatttggagctaccgcctgaagctgacactccaaaagtatcagtcagttctcgcaac
tcagtttttgtggccccaacacctggcatccctgccaaccaggtttggacacagaggtcg
tctcttgctgcagaacatgctgcagctggtaattttgatacagcaatgcgcttgcttaac
aggcaattgggaattagaaactttgctcctttgagacccatatttcttgatcttcatgct
gggagtcaaacctatcttcgtgccttttcatctgctcccataatatcattagcagttgaa
cgaggattcagtgaatctagtaatgcaaatgcaaaaggatctcctgcacttatttacagt
ttctctcagttggaggagaagcttaaggctggttacaaggccacaacaacagggaagttc
tctgatgctcttcgtctgtttctttctattcttcataccatccctttgatcgtggtcgag
tctaggagagaagtggatgaggtgaaggagttaattattatcgttaaggagtatgttttg
ggtttgcaaatggaattgaagaggagagaactcaaggacaatccagtacgtcagatggag
cttgcagcctattttacgcactgcaaccttcagttgccacatttgaggcttgctctatta
aatgccatgaccgtctgttacaaggctaagaacctcgccagtgcggcaaacttcgctcgc
agacttcttgagacaaatccctcaattgagaatcaagctaagacagccaggcaagtactg
caggcagcagagaggaacatgacggatgcctcccaactgaactatgacttcagaaaccct
tttgtgacctgtggtgcaacttatgtaccaatttaccgaggtcagaaggatgtttcttgc
ccttactgtagttccaggtttgtgctaagtcaggaaggacaactgtgctctgtttgtgat
cttgctgttattggagcagatgcgtctggtttactttgttctcccacacagaatcgatga
DBGET
integrated database retrieval system
