Cucumis sativus (cucumber): 101204180
Help
Entry
101204180 CDS
T02486
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101204180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101204180
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
101204180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
101204180
NCBI-ProteinID:
XP_004133873
UniProt:
A0A0A0L8Y2
LinkDB
All DBs
Position
3:complement(7501241..7506789)
Genome browser
AA seq
200 aa
AA seq
DB search
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMITT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgtcgccggtggtgaacacgtatccactttccagctataccttcggtaccaaa
gagccgaagctcgagaaggacacctctgtcgctgatcgtcttgctcgcatgaaagtcaac
tatatgaaggaaggcatgaggacaagtgttgaagcaattctgctggtgcaagaacataaa
catccccatattctactattgcaaataggcaacaccttctgcaagctccctggaggacgg
ttgaagccaggagaaaacgaaattgaaggtttaaagaggaagctcacaagcaaactgggt
gcaaattcgccctcactccagcctgattggcagattggtgaatgtgtggcgatttggtgg
agaccaaactttgaaaccgtcatgtatccttattgcccccctcatattacgaaacccaag
gaatgcaaaaagctcttcattgttcacttgtctgaaagagagtacttcgccgttcctaaa
aatttgaagctgcttgcagttccgttgtttgagctctatgacaatgtgcagagatatgga
ccagttatctcgacgataccgcagcagctttccaggtttcagttcaacatgatcaccaca
tga
DBGET
integrated database retrieval system
