Cucumis sativus (cucumber): 101204193
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Entry
101204193 CDS
T02486
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101204193
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101204193
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
101204193
NCBI-ProteinID:
XP_004136251
UniProt:
A0A0A0LGY0
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Position
3:complement(39272035..39279118)
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AA seq
642 aa
AA seq
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MANEILQLDIQDHHVVMDNGILQVTLSKPDGNVTGIKYNSIDNVLEVDDKEAHRGYWDLV
WNSGTPGTTGTFDEMRGREFEVMVQNEEQIELSFKRNYSFKDKAVPLNIDKRFIMLRNSS
GFYSYAIYEHMREWPPFNLPQTRIVFKLRKDKFHYMAIADDRQRFMPLPEDRLRHRGKPL
DFPEAVLLVNPKEPEFKGEVDDKYQYSCENKDLKVHGWISMDPPVGFWQITPSSEFRSGG
PLKQNLTSHVGPYALAMFLSAHYSGEDLVLKVSPDEPWKKVFGPVFFYLNSVSDGGDPLS
LWEDAKTQMSKEVQSWPYSFPASEDFPPPNQRGRLTGKLFVLDRYVNEEKMPATDAYVGL
AAPGDVGSWQTEKKGYQFWTKTDADGSFSIEHVRIGDYNLYAWVPGFIGDYRYDVLINVS
SGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYIPDPDPKYINKLYINHPDRFRQYGL
WEKYAELHPDADLVYSVGVSDYTKDWFFAHVNRKRNDGSHLATTWEIKFRLDNIIDKGVS
YTLRVALATANVAELQIQVNNPEAKPSLFTTGVIGHDNAIARHGIHGLYRLYSVDILGSL
LVEGENTIFLSQIINNSSFNGIMYDYIRLEGPPSDLIPLNNS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgagatactccaattggatattcaggatcatcatgtagttatggataatggt
atattgcaagtgacactgtccaagccagatggaaatgttactgggataaaatacaacagc
attgacaatgttttagaagttgatgataaggaagctcatagagggtactgggaccttgtg
tggaactctgggactccgggaacgacaggaacattcgatgagatgagaggaagagaattt
gaagtgatggtgcaaaatgaggaacagatagagctgtcgtttaaaaggaattattcattc
aaggacaaggctgtacccttaaacatagacaaaaggttcataatgcttcgtaactcctct
ggattctactcatatgccatctatgagcacatgagggaatggccaccattcaaccttcct
caaacgaggattgtgtttaagctaagaaaagacaagtttcactatatggccatagcagat
gacagacagagattcatgccacttcctgaggatagactacgtcacagaggaaaacctttg
gactttccagaggctgttttgctggtcaatcctaaagaacctgagttcaagggagaggta
gatgataagtaccaatattcttgtgaaaataaagatcttaaagtgcatggatggatatca
atggatcctccggtgggtttctggcaaatcactccaagcagtgagttcagatcaggtgga
cccctcaaacagaatctgacatctcatgtgggcccatatgctcttgcgatgtttcttagt
gctcactattcaggagaggacttggtgttgaaggtcagtcctgatgagccttggaagaaa
gtttttggccctgtatttttctatctaaattctgtttctgatggaggtgatccactttct
ttgtgggaagatgctaaaactcagatgtcgaaggaagttcaaagttggccatattctttt
ccagcttctgaggatttccccccaccaaaccaacgtggtagattgactggaaaattattt
gtccttgatagatatgttaacgaggagaaaatgccggcaactgatgcgtatgtgggactt
gcagcaccaggagatgttggatcatggcaaacggagaagaagggctaccagttttggacc
aaaacagatgcagatggctcgtttagcattgaacacgtacgcatcggggactacaatctt
tatgcttgggttcctggcttcattggtgactaccgttatgatgttctcattaatgtgtct
tcaggtagtgatatggacgtaggcgatcttgtttacgagccgcctaggaatgggcccaca
ttatgggaaataggcattcctgatcgctctgctgctgaattctatattcccgatcctgat
ccaaagtatattaacaaattgtatatcaatcatccagatagattcaggcaatatggactg
tgggaaaaatatgctgagttacatcctgatgcagacttggtatattcagttggtgtcagt
gattacacaaaagattggttctttgctcatgttaatcgaaagagaaatgatggatcccat
ttagcaaccacgtgggaaatcaagtttagacttgataatatcatagataagggcgtcagc
tatactttacgagtggctctggccactgccaatgttgctgaattacagattcaggtaaat
aatccagaagcaaagccaagtttatttacaacaggagtgattggacatgacaatgcaatt
gctaggcatggaattcatggactctatcgactctatagtgttgacatattaggatctcta
cttgtggaaggagaaaacaccatcttcctttcacaaattataaacaattcatctttcaat
ggcatcatgtatgattatatccgcctcgaaggccccccgtccgatttgatacctctaaac
aattcatag
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