Cucumis sativus (cucumber): 101204211
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Entry
101204211 CDS
T02486
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101204211
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101204211
Surveillance factors
Other surveillance factors
101204211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
101204211
NCBI-ProteinID:
XP_011656795
UniProt:
A0A0A0KDI6
LinkDB
All DBs
Position
6:6417801..6426661
Genome browser
AA seq
1648 aa
AA seq
DB search
MADGKFDLPDDLLSSRPSDHSWTPKASGGNDEEKVLSGFLDESKDSVASENSIPLSPQWL
YAKPSETKEVRAPTPVSLANSTDLNQKEGWRPDGSEDKKDWRKSTSENESGRRWREEERE
TGLLSGRRRKTERRMDNMSTKETVEGRVLPNSDRWHDGRTSGHDSRTSGHDSRTSGHDSR
TSGHDNRTSGHDSRTSSHDARRDNKWTLRWGPDDKEKESRMEKRSDADKEDVRSDSQSVS
GNRPASDRDSESRDKWRPRHRMESHVGSTSFRAAPGFSLERGRGDGGSNLGFTIGRGRGN
TIGKSSTGLIGVPHLDKIENVPGKPRYSSHAFCYPRGKLLDIYRRQKSDPLFSDMPDDME
ELQPMTQPSVVEPLAFVSPDAEEESTLGDIWKGKITSSGVVYNSHMKGKLTESVLGDLDS
VDRYQAALDLTLESENVSETANEDIPDVGHEVTNDEAFQDAIDGSIWSHPSMRDVLDGKY
VSHKEEEKRSSAISMPDSRGLAHTVSTAGSLRVMEIGSGHPGTQLNSGVNGRANYDHKRP
QNFDEIEFANSFDARSKLSDDPSSIFFIPFSEQNPNKSSDVRSEELSLFYLDPQGVIQGP
FIGADIILWYEQGFFGLDLPVRLADAPESPFCELGEVMPHLKVREGSVDCADVKSLSGQS
GASGGIMETSLPSKHSALDMNDASTTNEVHRTLAELHGLSNQHIASGMSETESPFQLHAK
GQSFHDVVAQDEEIVFSGRPGNDGYQFPNSPGVLPMVNSISQPSLLNELSDRNLPVQNEN
KLHPFGLLWSELEGTNTKPVEVTNSKHTKSVNNMPSSMVRTAPLVGKPEVSLNAETWLDV
YRRSMHSDQGVYQEANVAHSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHTNEATL
DHHMQQQNLIHQQLLANRSTPDLDHFLNLQMQQQQQQQRQLQLQHQLQQQQLQQQQKLLQ
EQHQSQVQQALLEQLLRRQMHDSGLGQSRIDPIRANNALDQVLMEQHLLHELHQQQSHHQ
QRSVDPSFEQLIKAKFGHLPPHQEQRDLSELLSRVQHGHIQSLDNQLAHQDVLQSRQLSM
ALRQRASMEDKRHACGPIWPEDEADQQFFRGHAGTQRLPTSGFELYQHQQRQAHADQLNH
LEHNLSFQDRFRLGLYEPASLPLERSISYPDVAQGMNLDVVNAMARARALELQESSAHNP
PGGQLVGQYAPGAIPQNHHHSLVSNQFHVSHFDGTEGNWSEKNERLGNEWMESRMQQRHI
NMNAEQQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMDLLNQKSVHQPTEPLDVGSGAS
FNRGSSGLYSGSGSLEQSFILHSGKERGMNNTLPVGSYGSNAYEPLQDEHPGSLSLTSNE
KVPYRSDSVSAVKGASILAGLKANGAINSSSSTMAAAGNLSMNRDVLEVEGRARGLKGEG
LVKTQAFQIQESMLDQVASADRGEFAMDTHTLSRHSSLGSAGFHNEKIANTFPEEVAKDP
VTIHNKDNTSLKRPPVSRTSASQDGLSVLIPDPVVRGKNSDGGRPDPTSILVNQENMAAM
KKEMRFRRSSSCSDSDVSETSFIDMLKKTAPQESHLATAGVPEPSDGMQGGKGGKKKGKK
GRQIDPALLGFKVTSNRIMMGEIQRLDD
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcaagttcgatctccccgacgatcttctttcctctcgcccttctgatcac
tcctggacccccaaagcttctggagggaatgatgaggagaaggtgctctcgggtttcctt
gatgagtctaaagactctgtggcttcagagaacagcataccattgtcccctcaatggcta
tatgccaaaccaagtgaaactaaggaagtgcgtgctccaacaccagtgtctcttgctaac
tcaactgatctcaatcagaaagagggttggcgccctgatgggtcagaggacaagaaggat
tggaggaagagtacttctgaaaatgaaagtggccgccgttggagagaggaagagcgagaa
actggcttacttagtggtcgccgcaggaaaactgagagacgcatggataacatgtcaact
aaggagacagtggagggtagagtgctccctaattcagacagatggcatgatggtcgcact
tctgggcatgatagtcgtacttctggtcatgacagtcgtacttctggtcatgatagtcgt
acttctggacatgataatcgtacttctgggcatgacagtcgtacttctagtcatgatgca
cgacgtgacaacaaatggacgttgagatggggacccgatgacaaagaaaaggaatcacga
atggaaaagcgatcagatgctgataaggaagatgttcgcagtgacagtcaatcagtgagt
ggcaatcgccctgcttctgatcgtgactctgaatcgcgtgataaatggaggcctcgccat
aggatggaaagccatgttggttcaacttcctttcgtgctgcacctggtttttcacttgag
agagggcgcggagatggggggtctaatttgggatttacaattggaagaggaagaggaaat
accattgggaaatcgtctactggtctcattggagtaccgcacttggataagattgaaaat
gttcctgggaaaccaagatactcatctcatgctttttgttaccctaggggtaagcttctc
gacatttataggaggcagaaatctgatccattgttctcggatatgcctgatgatatggaa
gaattgcagcctatgactcaacctagtgttgtagaaccattggcttttgtttctccggat
gctgaagaggagagtacccttggtgacatatggaaggggaaaatcaccagtagcggggtt
gtttacaattcacatatgaaaggaaagcttactgaatctgttttaggagatttagactct
gtagatagatatcaggctgcgctggatttaactttagagtccgagaatgtatcagaaact
gcgaatgaagatattcctgatgtgggtcatgaagttacaaacgatgaagcattccaagat
gccattgatgggagcatttggagtcatccttcaatgagagatgtcctagatggtaaatat
gtcagccataaggaagaggaaaaaaggtctagtgccatttctatgccagactctcgtgga
ttggcccacacagtttctacagccggctccctacgtgtgatggagattggcagtgggcac
cctggtactcagctaaattctggtgtgaatgggcgagcaaattatgatcataaaaggcct
cagaactttgatgaaattgagtttgccaattcgtttgatgccagatccaagctttctgat
gatcctagttctattttctttattcccttctctgagcaaaatccaaataaaagttctgac
gtgagatccgaggagctgagtttgttctatcttgatcctcaaggggttatacaggggcca
tttatcggggctgacatcatcttgtggtatgaacaaggtttctttgggttagacctgcct
gttcggttggcagatgccccggagtccccattttgtgagctaggggaggttatgccacat
ttgaaagttagggagggaagtgttgattgtgctgatgtgaaatctctttcaggccagtct
ggtgcctcaggaggaataatggagaccagtttaccttccaagcattcggcacttgatatg
aatgatgcatctacaacaaatgaggttcatcggacacttgctgaactacatggcctgtcg
aatcaacacatagcatctggaatgtctgaaactgaatcaccatttcaactacatgccaag
ggtcaaagctttcatgatgttgttgctcaggatgaagaaattgtgttttctggaagacct
ggaaacgatggttaccaatttcccaactctcctggggtgctgcctatggtgaattctatc
agccagccttctcttttgaatgagttaagtgatcgcaacctgcctgttcagaatgaaaat
aagttgcacccttttggattgctgtggtctgagctggaaggtacaaatacgaaaccagtt
gaagtcacaaattcgaaacataccaagtcggttaataacatgccttcaagcatggtaaga
accgcaccgttagttgggaagccagaagtatctcttaatgcagagacttggcttgatgtt
tatagaagaagtatgcattctgaccagggtgtataccaggaggccaatgttgctcattcc
ttaccacatatagaacaagaatctaataggtttgatttggcagatcaactcatgtctcat
caatatcatcaggcacttcaacagcggaatttattgtctcacactaacgaagctacttta
gatcatcatatgcaacaacagaatcttattcaccagcagctgttggctaatagaagtaca
cccgatcttgatcatttcttgaacttgcagatgcaacagcaacaacaacaacaacggcag
ctgcagttacagcatcagttacagcagcagcagttgcagcagcagcaaaaacttttgcag
gaacaacatcagtctcaagtccagcaggcattgcttgaacagttgttgcgtcgacaaatg
catgattcaggccttgggcagtcacgtattgatccaattagagccaataatgctcttgat
caggtgttaatggagcaacaccttttacatgagctacatcagcaacaatctcatcatcaa
caaagatctgttgatccatctttcgagcagcttatcaaagcgaagtttggtcacttgcca
ccgcaccaagaacaaagagatttgtctgaattattatctcgggttcagcatgggcacatt
caatctttggataatcaacttgcccaccaggatgtgctacagtcgagacagttgtctatg
gcattaaggcagagggccagtatggaggacaagagacacgcctgtggtcctatctggcca
gaggatgaggccgatcagcagtttttcagaggacatgctggtacacaacgtctaccaact
tcagggtttgaattataccagcatcaacagaggcaagctcatgcagaccagctgaatcac
cttgagcacaacctttcctttcaagatcggtttaggctaggtctttatgagcctgcttca
cttccgctcgagagatcaatatcctatcctgatgttgctcaggggatgaatctggatgta
gttaatgccatggctcgtgctcgggctttagaattgcaagaatccagtgcacataatcca
cctggtggtcaactggtggggcaatatgcacccggtgccattccacagaatcatcatcac
tctctagtcagtaaccagttccatgtttcacattttgatggaactgaaggcaactggtct
gagaaaaatgagcgtcttggaaatgaatggatggagtctcggatgcaacaaaggcatatc
aatatgaatgctgagcaacaaaaaagggagttggaggctaaaatgatttctgaagatcca
actttatggatgtcagatggacttaatgatgagaagtcaaagcagttattaatggaccta
ctcaatcagaaatctgttcatcaacccaccgaacccctggatgtaggaagtggagcatct
ttcaatagaggatcatctggcctctattctggatcaggctctcttgaacaatcgttcatt
cttcattcaggcaaggaaagaggaatgaacaacacattgccggtagggtcttatggttct
aatgcttatgaaccactgcaagatgagcatcctggcagcttgagcttgacaagcaatgag
aaggtcccatacaggtcggattctgtgtctgctgtcaagggagcatcaattttggctggt
cttaaagccaatggtgcgattaacagctctagttctaccatggctgccgctggtaacctt
tctatgaatagggacgtcttagaggtggagggtagggcacggggattgaaaggtgagggt
ttggtgaaaactcaagcttttcaaattcaagaaagcatgcttgaccaagtggcatctgct
gatcgtggggaatttgcaatggatactcatacccttagtcggcattcatctcttggttct
gctggatttcacaatgaaaagattgctaatacgtttccagaagaagttgctaaagacccg
gtgaccattcacaacaaagataatacttcattgaaacgccctcctgtctcacgcacttcg
gcatcccaggatggattgtctgttctgattccagatccagttgttagagggaagaactca
gatggtggaagaccggacccaactagtattttggtgaaccaagaaaacatggcagccatg
aagaaagagatgcgtttccgacgctcttcttcttgtagtgacagcgacgtgtcagaaact
tcttttatcgatatgctgaagaagacagctccacaagaatcccatttggcaacggcggga
gttccagagccatctgatggaatgcagggaggtaaaggtgggaaaaagaaagggaagaag
gggagacagatagatcccgctctactcggattcaaagtcaccagcaaccgaattatgatg
ggtgaaatccaacgcttagacgattga
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