KEGG   Cucumis sativus (cucumber): 101204248
Entry
101204248         CDS       T02486                                 
Name
(RefSeq) protein SEH1
  KO
K14299  nucleoporin SEH1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101204248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101204248
   04131 Membrane trafficking [BR:csv04131]
    101204248
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101204248
Membrane trafficking [BR:csv04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    101204248
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_EML DSE1_N WD40_Gbeta YAcAr Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 101204248
NCBI-ProteinID: XP_004149752
UniProt: A0A0A0KWZ8
LinkDB
Position
4
AA seq 326 aa
MEKAMATFHKGTLCSAWNYSSTRLATASSDGTLVIFDSPHPSSSSTSFTPTSNFKAHEVA
ITKIVWVPPEYGDSVACICSDGTSSLWEEVVEDAQPLQWKLCKLFKSNSSQILDLQFGNS
SSGLKMIAAFSDGYIKVYELMDPLNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPH
RGEQQSSFVIAFSSNTPQLNSAKVWEFDQAHHRWLPVAELALTAEKGDEVYAVAWAQNIG
RPYEVIAVATQRGIAIWHLGLSPDMDGRLSRERVALLSGHNGEVWEMEWDMGGMTLASTG
KDGMVRLWQSNLNGVWHQHAAFEPTS
NT seq 981 nt   +upstreamnt  +downstreamnt
atggagaaggctatggcgacctttcacaaaggcaccctctgttcagcttggaactactcc
tccaccagattagccaccgcttcttccgacggaaccctcgtcatctttgattctccccac
ccttcttcttcctccacctcctttactcccacctcaaacttcaaggcgcacgaggttgca
attaccaagattgtttgggtacctccggagtatggtgattctgttgcgtgcatatgttca
gatggaacttcatcattgtgggaggaggttgttgaagatgcccagcccctacagtggaag
ctatgcaaactcttcaaaagtaattcatctcaaatcctagacttgcaatttggaaattcc
tcctctggtctgaaaatgattgctgcattttcagatggttatataaaagtttatgagctt
atggatcctttgaatttgaagaactggcaacttcaggctgaatttcagaatgttattgat
tccatttctacagtcaggaaatcttcttgttcatctgcaagtatatcatggaatcctcat
cgaggggagcagcaatcaagctttgttattgcttttagttccaatacaccgcagcttaat
tcggccaaggtttgggaatttgatcaggctcatcacagatggcttcctgtggcagagttg
gctttgactgctgagaaaggtgatgaggtttatgctgtcgcgtgggcacaaaatattgga
aggccatatgaggtaatagctgttgcaacccagagaggaattgcaatatggcatcttgga
ttaagccccgacatggatggaaggctctcaagagaaagagttgctctgctttctgggcat
aatggcgaggtgtgggagatggagtgggacatgggtggtatgacattagcatcaacagga
aaggacgggatggtacggttgtggcaatccaacctcaatggtgtttggcaccaacatgct
gcatttgagccgacttcttaa

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