Entry |
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Name |
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KO |
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Organism |
csv Cucumis sativus (cucumber)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csv00001]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101204300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csv03019]
101204300
04131 Membrane trafficking [BR:csv04131]
101204300
03029 Mitochondrial biogenesis [BR:csv03029]
101204300
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:csv04812]
101204300
Messenger RNA biogenesis [BR:csv03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101204300
mRNA cycle factors
P-body specific factors
101204300
Membrane trafficking [BR:csv04131]
Others
Actin-binding proteins
Myosins
101204300
Mitochondrial biogenesis [BR:csv03029]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101204300
Cytoskeleton proteins [BR:csv04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101204300
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:25937697..25954285
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AA seq |
1529 aa
MSGPVNIIVGSHVWIEDPKLAWIDGEVFRINGEEVHVRTTNGKTVVANISKIFPKDTEAP
AAGVDDMTKLSYLHEPGVLSNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQY
KGTGFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLE
RSRVCQISDPERNYHCFYLLCAAPPEEREKYKLADPKSFHYLNQSKCFELDGVNDAHEYL
ATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNTTAEL
LKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWLVEKINNSI
GQDPNSKSLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKL
SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQALLTTSKCSFARALFPPQPDETSKSS
KFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENSNVIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDDKVACQMILDKMGLKGYQIGKTKIFLR
AGQMASLDAKRTEVLSNAARTIQMQIRTFIARKEFVALRKAAIHVQSFSRGVLARKLFEQ
LRREAAALKIQKCFKRYIARKSYLDLLSSAIKLQTGLRAMKARDEFRFRKRTKAAIIIQA
RLRCHMAHSYYTRLQKAALYTQCGWRRRVARKELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEEEKAQEIAKLQDSLHNMQLQVEEANAQVIKEREAAQKAIEEAPP
VVKETPVFVEDTEKINSLMAEVESLKASLLSEKTSAEEARKACTDAEAKNVELTKRLQDT
DQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKALSARPKSMIIQRTPENGNI
PHGEAKVSLDTTLALSTVREPESEEKPQKSLNEKQQENQDLLVKCISQDLGFSGGKPVAA
CVIYKCLLHWRSFEVERTGIFDRIIQTIASSIEVPDNNDVLTYWLSNTSTLLLLLQHTLK
ASGAASLTPQRRRTTSASLFGRMSQGLRASPQSGGLSFLNGRGLGRLDDFRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAMAQQALIA
HWQSIVKSLNNYLKIMKANYVPPFLVRKIFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLSELEQWCSGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKDLCPVLSIQ
QLYRISTMYWDDKYGTHSVSSEVISSMRILMTEDSNNAISSFLLDDDSSIPFSVDDISKS
MKQVDVTDIDPPPLIRENSGFGFLLQRAE |
NT seq |
4590 nt +upstreamnt +downstreamnt
atgagtggaccagttaacatcattgtaggttcgcatgtctggatcgaagatccaaaacta
gcttggattgacggtgaagttttccgcatcaatggcgaggaagttcatgttaggactacc
aatgggaaaacagttgttgccaatatatcaaagatattccccaaggataccgaagcacct
gctgcaggtgtcgatgacatgacaaagctgtcatacttgcatgagcctggagttctgagc
aacttggcgaccagatatgaactcaacgaaatatatacatacactggaaatatacttatt
gcaataaatccattccaaaggctacctcatctttatgatactcacatgatggagcaatac
aaaggaactggatttggagaactgagtcctcatgtctttgcagttgctgaagtggcatac
agagcaatgattaatgaaggaaaaagcaattcaattctagttagtggagaaagtggtgct
ggtaagaccgagaccacgaagatgctcatgcggtatcttgcataccttggaggtcggtct
ggagtggaagggcgaactgttgaacaacaagtcctagaatccaatcctgttcttgaagca
tttggcaatgcaaaaactgttaggaacaacaattcaagtcgttttggtaaatttgttgag
atccaatttgataagagtgggagaatatctggggcagctgtccgaacttatttgcttgaa
agatctcgagtatgtcagatctcagatcctgagagaaattatcattgcttttaccttctc
tgtgcagctcctcctgaggaaagggagaagtataagttagcagaccctaaatcattccac
tacctaaatcaatctaaatgctttgagttggatggagtgaacgatgcccatgaatatctt
gcaaccagaagggctatggatgtagttggaatcagcgaggaggagcaggaagcaattttt
agggttgtagctgcaattttacatcttggaaatattgaatttgcaaagggagaggagata
gattcttcagtcattaaggatgaaaaatccagattccatcttaataccactgccgaactg
cttaagtgtgatgcaaagagtttggaagatgcactgattcaacgtgttatggtaacgcca
gaagaggttataactcgaactcttgatcctgtggctgctttgggtagtagggatgccttg
gctaaaacgatttattcacgactctttgattggcttgtggagaagatcaacaattcaatt
gggcaagacccaaattctaaatcattgattggagttttggatatttatggatttgagagt
tttaaattcaacagttttgaacagttctgcatcaatttcacaaatgaaaaactgcagcaa
catttcaatcagcatgttttcaaaatggagcaggaggaatataccaaagagcaaatcaat
tggagttatattgagtttgttgacaaccaggacgtgttggatctgattgaaaagaaaccg
ggaggaattattgcacttctggatgaggcctgcatgtttcctaaatctacacacgaaaca
tttgctcagaagttataccagactttcaagagcaacaagcgcttcattaagcctaagcta
tcgcgtactagttttacaatatctcattatgctggggaggtgacttatttggcagatcta
tttttggacaaaaacaaagactacgtggtagcagaacatcaggccctcttaacaacttca
aaatgctcctttgcgagagctttatttcctcctcaaccagatgaaacatcaaaatcctca
aaattttcttccattggttcacgttttaaattacaacttcaatccttaatggaaacctta
aattcaacagaacctcactacatcagatgtgtaaagccaaataatgtgctcaagcctgct
atttttgaaaattcaaacgttatccagcaattacgttgtggtggtgtcctcgaagcaatt
aggatcagctgtgctggatatccaaccagaagaacattttatgagttcctcctacgtttt
ggggttcttgcaccagaagttctggatggaaactatgatgacaaggtagcctgccagatg
atcctggataaaatgggtctgaaaggttatcagattggtaagacaaaaatattcctgagg
gctgggcagatggcttctctggatgcaaagagaacagaggtgcttagcaatgctgccaga
actattcaaatgcaaattagaacgtttattgcacgcaaggagtttgttgcattacgtaaa
gctgctatacatgtgcaatcattttctcgaggtgttttggctcgaaaactatttgagcag
ttgcgacgggaagcagcagctttaaagatccagaagtgtttcaagagatatattgccagg
aaatcatacttagatttgctctcatctgcaatcaaattgcaaacagggttaagggcaatg
aaggctcgtgatgaattcagattcagaaagcgtaccaaggcagcaattatcattcaggca
cgtttgcgttgtcacatggcgcattcttactatacgagactccaaaaagctgcattatac
acacagtgtggttggaggcgacgagttgcacgaaaggagctaagaaaactgaaaatggct
gcaagggaaactggtgcactcaaagaagcaaaagacaaattagaaaaacgtgtagaagaa
ctcacatggcgcttacaacttgagaagcggctgaggactgatctggaagaggagaaagcc
caagaaattgccaaattacaagattctttacacaacatgcaattacaagttgaagaagca
aatgctcaagttatcaaagagcgagaggctgctcagaaagctattgaagaagcacctcca
gttgtcaaggaaactccagtttttgtcgaggatactgaaaaaatcaattccttaatggct
gaggtggaaagtctgaaggcttcgctgctgtcagagaaaacgtcagctgaagaagctaga
aaagcttgtactgatgctgaagccaaaaatgtggagctgactaaaagacttcaagacaca
gaccagaaggtggatcagcttcaggagtcagtccagaggcttgaagagaagctttcaaat
tcagaatcagagaaccaggtacttcgtcaacaagccttgacgatgtcgccaacaggaaaa
gctttatctgcaagacccaagtcaatgattattcagaggacaccagagaacggaaatatt
ccacatggagaggccaaagtatcattggatacaactcttgcattatcaactgtacgtgag
cctgaatcagaggaaaaaccacagaaatcacttaatgagaaacagcaggagaaccaggac
ctgctagtgaaatgcatatctcaagatttgggattttctggaggcaaaccagttgctgct
tgtgtcatctataaatgtcttcttcactggaggtcgtttgaagttgaaagaactggcata
tttgatcgaatcattcaaacaatagcttcatccatagaggtcccggacaacaatgatgta
ttaacttattggttatctaatacatccactttattgttgctgcttcaacacactctcaaa
gctagtggagctgctagcttgactcctcaaaggaggagaactacttcagcttctcttttt
ggaaggatgtctcaaggattaagggcatccccacaaagtggtggactatcgtttcttaat
ggtcgggggcttggtagattggacgattttcggcaggttgaggcaaagtatccagcactg
ttgtttaagcagcagcttacagcatttttggagaaaatatatggaatgataagagacaac
ctgaagaaagagatctcccccttactgggactgtgtattcaggctcctcggacatcccgt
gcaagcttagtgaaaggacgctcccaagcaaacgccatggctcagcaagccttgattgca
cattggcaaagcattgtgaaaagcttaaacaattatttgaagatcatgaaagcaaactat
gttcctccattcttggtccgcaaaattttcactcagatattctcatttattaatgttcaa
ctatttaacagccttcttttgcgacgtgagtgttgttcattcagcaatggcgagtatgtg
aaagctggcttgtctgaattggaacagtggtgttctggagcaaccgaggaatatgcaggg
tctgcctgggatgagttaaagcatattaggcaggctgttggattccttgttattcatcaa
aagcccaaaaagacattgaatgagataacaaaagacctatgtcctgtgcttagcatacaa
cagttatataggatcagtacaatgtactgggatgacaaatatggcacgcatagtgtatct
tcagaagttatttcgagtatgcgaattttgatgactgaagactccaacaatgctatcagc
tcattccttttagatgatgactctagtataccattttctgtggacgatatctccaaatcc
atgaaacaagtagatgtaacagatatagatcctccaccgctgatacgagaaaactctggg
tttgggtttttgcttcaacgtgcagagtag |