Cucumis sativus (cucumber): 101204633
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Entry
101204633 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC101204633
KO
K14311
nuclear pore complex protein Nup188
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101204633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101204633
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101204633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101204633
NCBI-ProteinID:
XP_011649284
LinkDB
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Position
2:13052577..13096318
Genome browser
AA seq
1953 aa
AA seq
DB search
MTSSTSVDSFLWWDPFHPFLTELENVSLSSTELPPTLMKKVDANHAWFVGTVSLFKKPNE
KSRVALNSQEVKIGAHTLSIQPELKAKALKLSSYLCLDEVQSYILAARTIEHENVHENFP
FKELLHMVLLEYYIERQCLLKCTRRILLHALFVGNGSKKGDIFDTALRLVTDGLENKLIS
VLQSLLSSSHSEQMDVDLFTFWAEETLTEDNLILDILFIAYYESFIRCNADRWKALCLLY
KGIISGSYNMEILAISSAAIHSSRQVKVRLLFILMETLDLESLLQMVHDQTTFRHGASVF
TLSDFQEMDAIVSSLNAFEIKEAGPLLLTWAVVLCLISSLPGKEEHNVLLEIDHVGYVRQ
AFDSAAFNYFLDVLHSDLLKESEGLIVGYRSVLRTFISAFIASYEINLQMEDTTFCSILD
ILCNIYRGEESLCIQFWDKESFTDGPIRCLLYDLEGEFPFRLVEFVRFLSSLCEGAWPAK
CVFDFLDKSVGISSLFEINSSTLVEHIPEIVETQQPLPVPGMEGMLIPCKTRGRVLKVVG
GNTVLVRWEYKLPGMLMLLMRLAQGMYLNNDEQVAILDLLSRMISFNTAVCFALMGGTHI
SNPEVADIARPTEKNLWLVEVICVLVRNLSPDSSNAAVMAIGLNILSKMLKCFPAIVTPV
ALKANIFNVAGHDALSESWLQFGKLAKMLLIDVEHNDSDSPLSISLLDFTMQLLETGLEN
DAIVALIAFCLQYILVNHEYWKYKVKHTRWIVTLKVLEMMRRCILVSSGPGKLGPLVQNM
LLFDSSIHNTLFRVVCTTRQALEKLYISRLSEPREIEGLENAICSVLDIFFIMLSAFSKD
SSAAPAVFHQALISLKTKPIPIAAAVISLLSYFRNVSVQVGAARVLSMLFFITDDVQPHL
SSACFSLDDEQIAELRQSIECILLKKSAWDEDLFVAVVNMLTSAALYQPSFLVTLLASKE
NLTGQLNVSGGGTHQTKDSLQASSGLEKSSIIDALLQYLKEANKHAKSDLRIQLNVLNFI
KALWQTAGPFIMVLNRMKTSEKVLEQLTDGVSHFVSGEACAPKTIAAMQALNSAYKYLSL
SSMVEIMSYDIFLQKKMLHGESIVEQQTGPKDKAPDDVSSENSKLSRSLSDVKNMLSAAC
DGFLLGKLTKLLASCEFDNETYHRAKVASSLFIVHVMSKLATGDGGSLSVSMLGKIHELL
QKLISLPAFAELSSQYLQRGYSGGDELNNLILSDLYYHLQGELEGRSIGSGAFRELSLYL
IDSEIFHFHKQNYEDDIFVAIKDAHLFDLVHIQADLGLDLWDYSEWKESKSIAARMLSCM
EDVNSMILVTRSKLTALRALITILTLMADDTLEKETTIRRKIIDHLVRYCIADMWQYLDV
TIESLAFGLGASNCVLSFLTAQLELVTLLIRSADKVVPLSVCALILKTSGSGLKQLSCIQ
PVAGAHKTINLLLKLVLSSLECHDLNSFSDRQRNPEYVKDLAEFSNVLLGLLPIVCSFIT
NAEHCTLALTTLDLILRNFLSSETWLPVLQKHLQLQHLFLKLQDEKSLSSVPVLMKFFLT
LARVRGGANMLISSGLLSYLQLLFTRFLDDSICSQSNYNNQNHQLIWKLGLAVITAVVQS
LGDGSYLDVLDNVMNYFFSEKVYLISYHLNAPDFSPDEHDKKRSRTQRTKTSLCALRETE
QTLMLMCVLARHRNSWAKATKEIDSQLREKCIHMLAFVSRVTHRHGESPAKVAPFTCPPN
LKEEFDHCKKPSFIQSKSGWFALSPLACGSKSEFTAPSTSLIVKDQTTENSDPVCPTHFS
DTLAMHIYTITFLLLKFLCLQAEGAAQKAEDVGYVDLTHFPELPMPEILHGLQDQAMAII
CELCDTEAKHIDIDVQNFCRLLLQIMEMTLYLEHCVVQICGIRTVLGRVEDFSREVKLLL
KGVEGHAFLKQSVYSLKQILSFVYPGLVQIEKL
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctccacttcagtcgactcgtttctttggtgggatcctttccatccatttctt
actgagctcgaaaatgtttccctctcatctacagaacttcctcctacgctgatgaaaaag
gtggatgccaaccatgcttggttcgtgggtacagtttcactcttcaagaaaccgaatgag
aaatcaagggtggctttaaattctcaggaagttaaaattggagctcacacgctatctata
caacctgaacttaaagctaaagctctcaagttgagctcttatttgtgtttggatgaggtt
caatcatacattctggctgcaagaaccattgaacatgagaatgtacatgagaacttccca
tttaaggaacttcttcacatggttctacttgaatattacattgaacggcagtgcttgctg
aaatgtacaagacgtatactcctgcatgctttatttgttgggaatggttccaaaaaaggt
gatatttttgacacagcactaagactggtcactgatggattagaaaacaaacttatatca
gtcttgcagagtcttctgtcctcctcccactccgagcagatggatgttgaccttttcaca
ttttgggctgaagagaccttgacagaagataatctaatcttggacattctttttattgca
tattatgagtcgtttattagatgcaatgctgatcgatggaaagcattgtgtctgctttat
aagggaatcatatctggttcttataacatggaaatacttgcaatatcaagtgctgcaata
cattcttctcgtcaagttaaagttcgattattatttatcctcatggaaacattggaccta
gaaagtcttctccagatggttcatgatcaaacaactttcaggcatggtgcctcagttttt
acgttgtctgattttcaagagatggacgcaatagtatctagtttgaatgcttttgaaata
aaagaagcaggtcctttgttactaacatgggcagttgttttgtgcctaatatcctcactt
cccggaaaagaggaacacaatgtactgctggagattgatcatgttggttatgtacgtcaa
gcttttgattctgcagcattcaattattttcttgatgtacttcacagcgatttactgaag
gaatcagaaggacttattgttggctatcgaagtgtcttgagaacctttatttctgcgttt
attgcatcctatgaaattaatcttcagatggaggacactaccttctgttcaattttggat
attctgtgtaatatataccgtggggaggagtcactttgcattcagttctgggacaaagag
agtttcactgatggtcctattcggtgtctactttatgacctagaaggtgaattccctttc
aggcttgtggaatttgttcgttttttgtcgtctctctgtgaaggagcttggccagcaaaa
tgcgtgtttgactttctagataagtctgtgggcatatcatccttgtttgagattaatagc
agtaccttggtagaacatatcccagagattgtggaaactcaacagccactacctgttcct
ggaatggaaggaatgttgattccttgtaaaacacgtggacgtgtcttgaaagtggttggt
ggaaatactgttcttgtacgttgggagtataaattaccagggatgctcatgttgctcatg
cgtttggctcaagggatgtatttgaataacgatgaacaagttgctatacttgacttgttg
agtcggatgatttcctttaatacggctgtctgttttgctttgatgggtggtacacacatt
tcgaatcctgaagttgcagacatagctcgtccaacagaaaagaatttgtggttggttgag
gtcatttgtgttctcgtgagaaacttatctcctgattcaagtaatgctgcagtgatggcc
ataggtctaaatattttgtcaaagatgttgaaatgtttccctgctattgtcactcctgtg
gcgcttaaggccaatatcttcaatgttgctggccatgatgcactgagtgagtcatggctt
caatttggaaagctcgcgaagatgttgcttattgatgttgagcacaacgattctgactcc
ccactgtcgatatcactactggactttaccatgcaactactggagactggactagaaaat
gatgctattgtagcacttattgctttctgtcttcagtatattctagttaatcatgagtat
tggaagtacaaagttaagcatactcgttggattgtaactttgaaggtgcttgagatgatg
aggagatgcattctcgtaagctcaggccctggaaaactggggccacttgtccagaatatg
cttctttttgattcttccatccataacactctttttcgagtggtttgtacgactagacaa
gctctcgagaaactatatattagccgtctttctgaaccaagggagattgagggtttagag
aatgccatctgttctgtcctggatatttttttcatcatgctttctgcattttcaaaggat
tcgtcagctgcacctgccgtgtttcatcaagcattgatatcattgaaaacaaaacccatt
cctatagcagcagcggtcatttctttgttatcttattttcgaaatgtgagtgtacaagtc
ggtgcagcaagggtactgtctatgttattttttataacagacgatgtgcaaccccatttg
tctagtgcatgctttagtcttgatgatgaacaaatagcagagttgaggcagtcaattgag
tgcatacttcttaaaaaatctgcatgggacgaagatctctttgttgctgtagttaacatg
ttgacatcagcagcactttatcagccttctttccttgttactttattagctagcaaggaa
aatttgactggccaactaaatgtcagtggtggtgggactcatcaaactaaagattctttg
caagcttcatcaggattggagaaatcaagtattattgatgcgctcttacaatatctgaag
gaagccaataagcatgccaaaagcgacctccggatacagctgaatgtactcaactttatc
aaggcactttggcagacagctggcccatttataatggttttgaataggatgaaaacttca
gagaaggttttggaacaattgacagacggtgtttcccacttcgtttctggagaagcttgt
gcccccaaaactattgctgcgatgcaggctctaaactctgcttacaaatatctatcactc
tcatccatggtggaaataatgtcatatgacatttttctgcaaaaaaagatgctacatggc
gagtcgattgtagaacaacagactggaccaaaggacaaagctcccgatgatgtgagcagt
gaaaattcgaaattatccaggagtctctctgatgtcaagaatatgttatcagctgcatgt
gatggcttccttttaggcaagctgaccaagctgcttgcttcttgtgaatttgataatgaa
acatatcaccgtgcaaaggttgcttccagtttattcattgtgcatgtgatgtccaaatta
gcaactggtgacgggggaagcttgtcagtttcaatgctcgggaagatccatgaactgttg
caaaagcttatcagtttgcctgcttttgcagaattatcatcacaatatttgcagcgtggt
tacagtggaggtgatgaattgaacaatttgattttgagcgatctttattatcatctacag
ggagagcttgaaggccgtagtattggctccggagcttttagagagctttctctatacctt
attgattctgaaattttccattttcacaaacagaactatgaggatgatatttttgtggcc
atcaaagatgcacacttgtttgacctcgtgcacatacaggcagatttgggattagatcta
tgggattattcagaatggaaagaatctaagtcgattgcagcaagaatgcttagttgcatg
gaggatgtaaactcaatgatattggtcaccagatcaaagcttactgctttgagagcattg
ataaccatattaactttgatggccgatgatacattggagaaagaaactacaattagaaga
aagatcattgatcatcttgttagatattgcattgcagacatgtggcaatatctcgacgtg
actattgaatcattagcatttggtttgggtgcctccaattgtgtcctttcttttcttact
gcccaattggaattggtaactcttcttatcagatctgcagataaagttgtgcctctgtct
gtttgtgcacttattttaaagacctcaggctccggtcttaaacagttgagttgcatccaa
ccggttgctggagctcataagacaattaatctcttgctgaagttggttctttcttctttg
gaatgtcatgatcttaattcattttcagatcgacaacgtaatcccgaatatgtaaaagac
ttagctgaattttctaatgtattgttgggtcttttacctatagtatgtagctttatcaca
aatgctgagcactgcaccctggctttgactactctagacttgatacttagaaattttttg
tcctctgagacatggcttcccgtcctacaaaagcatcttcagctgcaacatctttttctg
aagcttcaggatgaaaaaagtttgtcttctgtccctgtattaatgaagttcttcttgacc
cttgctcgtgtacgggggggtgctaatatgctcatatcatctggtctcttgtcatatctt
cagttgttgtttactcgatttttggatgacagtatttgctcgcaatccaactataacaat
caaaatcaccaactaatttggaaacttggattagctgttatcactgctgtagtgcaatct
ttgggagatggttcttatcttgatgttcttgataatgtgatgaactactttttctcagag
aaagtttatctgatctcctaccatctcaatgcaccagacttctcccctgatgagcacgac
aagaaaaggtcacggactcaaagaactaaaacttctctctgtgctctcagggagacagag
caaactctcatgctgatgtgcgtgctagcaagacataggaactcttgggcaaaggcaact
aaagaaattgattcccagctgcgtgagaaatgcatacacatgctggcttttgttagtcga
gttactcatcgccatggagaatctcctgcaaaggttgctcctttcacatgccctccaaat
ctcaaagaggagtttgatcattgcaagaaaccatcgtttatccagagcaaaagtggatgg
tttgctctttcgccactcgcttgcggatcaaaatccgagttcactgcaccctcaacgtct
ttgatagtcaaggatcaaaccaccgaaaattcagatccagtttgtccaacacatttctct
gatactctggccatgcatatctatacaattacatttcttcttttgaagtttttatgtcta
caagctgagggggcagctcaaaaggctgaagatgtaggttatgttgacctcacacatttt
ccggagctaccaatgcctgaaattttacatgggttgcaggatcaagcaatggctatcatt
tgcgagctctgtgatactgaagccaagcatattgatattgatgtccagaatttctgccgt
ttgctgttgcaaattatggagatgacactgtacttggaacactgtgttgtgcagatttgt
ggaatacgaaccgtattaggccgagtggaagacttctcaagggaagtcaaattattattg
aaaggtgttgagggtcatgcattcttgaaacaatcagtatattccttgaagcagatactg
tcgtttgtctatcctggcttggtgcagattgaaaagttgtga
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