Cucumis sativus (cucumber): 101204744
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Entry
101204744 CDS
T02486
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101204744
Spliceosome [BR:
csv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101204744
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_1
PPR_long
ARM_TT21_N
ARM_TT21
ANAPC3
L1R_F9L
Motif
Other DBs
NCBI-GeneID:
101204744
NCBI-ProteinID:
XP_004152074
UniProt:
A0A0A0LBL0
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All DBs
Position
3:25429248..25432801
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AA seq
798 aa
AA seq
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MVFSMSIPTSAFSTVTRLRSLTLSLSPYHHYFHCPNHIIPTLFLPAYSVKVRRQLPRIRA
FASGSFVKQLVYDHDSPSESEEHLSSSFSNGGDGFHFENGFASVDLKHLGTPVLEVKELD
ELPEQWRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLIVHCLRIRENETAFR
VYKWMMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAY
LSAPVQGCIEEASTIYNRMIQLGGYQPRLSLHSSLFRALVSKPGDLSKHHLKQAEFIYHN
LVTSGLELHKDMYGGLIWLHSYQDTIDRERIVSLRKEMQQAGIKEEREVLLSILRASSKM
GDVMEAEKLWQELKYLDGNMPSQAFVYKMEVYAKMGKPMKALEIFREMEQLNSTNAAAYQ
TIIGILCKFQVIELAESIMAGFIESNLKPLTPAYVDLMNMFFNLNLDDKLELTFSQCLEK
CKPNRTIYSIYLDSLVKVGNLDRAEEIFSQMETNGEIGINARSCNIILRGYLLCGNYMKA
EKIYDLMCQKRYDIDPPLMEKLEYILSLSRKEVKKPMSLKLSKEQREILVGLLLGGLEIE
SDDERKNHRIQFEFHRNCKTHSVLRRHIYEQYHKWLHSASKLTDGDVDIPYKFCTVSHSY
FGFYADQFWPRGRRAIPNLIHRWLSPRVLAYWYMYGGCRTSSGDILLKLKGSHEGVEKIV
KSLREKSIHCKVKRKGNMYWIGLLGSNATWFWKLIEPFILDYLKESTQADSLNLVGVLNG
SENINFDSESDSVEETSN
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggttttctccatgtccattcctacctctgcattttccactgtgacccgtcttcgttct
ctcactctttccctctctccataccatcactactttcactgtcccaatcatataattcct
actctctttcttcctgcatattctgttaaagtacgacgacaacttccccgaattcgtgcc
tttgcttccggttcttttgttaaacagctggtgtacgaccatgattccccgtccgaatct
gaggagcacttatcatcttcattcagtaatgggggtgatggttttcattttgaaaatggt
tttgcatcggtggatttgaaacatttgggaacgcctgtgctcgaagtcaaggagctggat
gagttgccagagcaatggcgaagatctaaagtggcttggctttgtaaggaattgccagca
caaaagccgggaacagtgatacgactgcttaatgcacagaaaaaatggatggggcaggat
gatgcgacctatctcatcgtgcattgtttgcgtattcgtgaaaacgagacagcatttagg
gtgtacaagtggatgatgcaacaacattggtatcgatttgattatgctttatctactaag
cttgctgattacatgggcaaggaacggaagttctcaaagtgtcgagaagtatttgatgat
ataattaatcagggatgtgtgccaagtgaatccacatttcatatattgattgttgcgtac
cttagtgcccctgttcaaggatgcatagaggaagcaagtaccatttacaatcgtatgatc
caattaggaggttaccaaccacgtcttagcttgcacagttctctctttagagctcttgtg
agcaaaccaggagatttgtcaaagcatcatcttaaacaggctgagtttatatatcacaat
ttggtaacaagtggacttgagctacataaagatatgtatggtggtctaatttggctacat
agttatcaggatactattgacagagaaaggatagtgtcactaaggaaagaaatgcaacaa
gcaggaatcaaggaggaaagagaagtccttttgtctatcttgagagcaagctcaaaaatg
ggggatgtaatggaagcagaaaaactgtggcaagaacttaagtatttagatggtaacatg
ccatctcaggcttttgtttataaaatggaagtctatgcaaagatgggtaaaccaatgaaa
gctttggagatatttagggagatggagcagctgaactctactaatgctgcggcatatcag
acaattattggtattttatgtaaatttcaagtgattgaacttgcagaatcaatcatggca
ggcttcatagagagtaatttaaaacccctcacgccagcatatgttgatttgatgaatatg
tttttcaatttaaacttagatgataagttagagttaaccttctctcagtgccttgagaag
tgtaaacccaatcgtaccatctatagcatatatttggattctttggtaaaagttggtaat
cttgacagagctgaagaaatatttagtcagatggaaacaaacggagaaattggtataaat
gctcgttcatgcaacattattttacgtgggtatcttttatgtggaaattatatgaaggct
gaaaaaatatatgatttaatgtgtcagaaaaggtatgacattgatcctcctttaatggag
aaacttgaatatatcctaagcttgagtagaaaggaggttaagaagccaatgagcttgaag
ttgagtaaagaacagagggagattttagtagggttattgttaggtggcctggagatagag
tctgatgatgagaggaaaaatcacagaatccaattcgaattccacagaaactgtaaaact
cactctgttttgaggagacacatatatgagcaatatcacaagtggttgcattctgcttca
aagttgaccgatggtgatgtagatataccatataaattctgcactgtttcacattcatat
tttggtttctatgcagatcagttttggccacgaggtcgtcgtgcaatccctaatcttatt
caccggtggctgtcacctcgtgttcttgcatactggtatatgtatggaggctgcaggaca
tcatcaggggatattttactgaaactaaagggaagtcatgagggtgttgagaagattgtt
aaatctctgagagagaagtccattcattgcaaagtgaaaaggaagggcaacatgtattgg
ataggtttacttggaagcaatgccacatggttctggaaactaattgagcccttcattctg
gattacttgaaagaaagtacacaggcagacagtcttaacttggtgggggttttaaatgga
agtgaaaacatcaactttgatagtgaatctgattccgttgaggagacttcaaattaa
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