Cucumis sativus (cucumber): 101204824
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Entry
101204824 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC101204824 isoform X1
KO
K24155
rabconnectin-3a
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101204824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101204824
Membrane trafficking [BR:
csv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101204824
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101204824
RAVE complex
101204824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
101204824
NCBI-ProteinID:
XP_004134298
UniProt:
A0A0A0L3T8
LinkDB
All DBs
Position
3:6883407..6897299
Genome browser
AA seq
2491 aa
AA seq
DB search
MAGTASKMDPISRLPLPLLGSEPIPPAPNRLDPLGSSIDWIPDFAGYAWVAYGASSLLVI
SHFPSPLSPHETKFGPIFRQVLELSGDHLSAVNAVSWSPVLPSEGELAAAAGNRIWVFSH
DLGASRGSFCWRQNSVLVQSLKVEAIQWTGSGDGIIACGVEVVLWKNTNKSWEIAWKFKP
DVPQTLVSASWSTEGPFATAPHARISKTENMLTERACRSVLVSQSEGEYGHVKIELCHPL
PITVIQWRPSVNGPEIGKHSPRNVLLTCCLDGTVRLWSETENGKVRKFSKDVNNKKSMRR
HFSVAAVVEINQALKGTLGMDLFVTWATEIRGMCQPFEVTKKVQSSVGFEQNKAGNCEWL
ISLGPGSLVTFWAVHCLDDVSPLRFPQVTLWKKQELKGFEVGRHYTDGCTNLSNKFLLKK
VVISRIHQSGSPSICSLIQLLPCNSLVWSLLSAHTLTDVGDASFDQKRLESLSSCSFSSQ
LNLSGHAGKILHVAVHPYNCEVKIAASLDSNGLLLFWSLSSISNCALGSPTLTPTWELCG
KLVTQDSCSKYTSVQWAPSILDEELILLMGHARGIDFFAVRISQSDEENTECHYLCTIPF
TGHGPFENGPTNIFSILLPSDCNITYKFNKFMLLGIWMKGFQALSWEITLHAYDISGTGL
HCKCDIDNENRAELSILTFESAFGSKKYCVSIIPCSSQLPNSQIHDQITSFAVVHQGTFV
PVQQKLASSGEPSTPAYIMATGSADGCLKLWKSNVGKPSIFHVPWELVCVVVAHQGPITA
LSLTDCGRKIATISKDNLECKTSSVHLWELAYLGAGILLFEDELSFESNIIAVDWLTLGN
GQFLLGICLQNELCVYSLKRFGCHTLLETTKSLDTKTWICIGISRTLPSNCGFLWGPRTT
AIVLHDRYFCIVSPWLFLGVTNHDAMCNTHYIGETKTHHVNGTNTNISVAVFADKCCGIK
TLPDDIYERKYRPGSLGLISMPDVVDKLCGSLSSFHPQALLFNIYSGKWKRAYSALSHLI
EHLSSDKKSSANSTYTIPEIPLSDYFEGVIKTSTDKGVQWSTNSLSSQFKEGVSQWAFNW
DSISNDNSFVPSSTKSEFSSFIEPLEKLYELAGLTSMEKTQTLAIVDLLGEISNKSSSSA
YESLDEPGRRYWIAWRFQQLQFLRRESRSASMEELAIDSKLIGWAYHSDCQEILLNSVSS
NEPTWQEMRSLGVGIWFTNTTQLRTRMEKLARSQYLKKKDPKDCMLLYVTLNRIQVLAGL
FKISRDEKDKPLVGFLSRNFQEEKNKAAALKNAYVLLGRHQLELAVAFFLLGGDSYSAVS
VCAKNLGDEQLALVICHLVEGRGGPLQQHLITKFMLPSAIEKGDTWLASILEWELGNYTR
SFLNMLRLDSNSVTGPPFLSSKHIALLDPSVGMYCLLLATKNSMKKAVGVQSAEILCQLA
TLMMATSLNRRGLPLEALEHVSTCGSITDVSDGTNKVDIQCFDTISNICQKSPGDSSSWL
SVEFAVHLEHQVKLDLAAQYFSKLIRKHPSWPTINFESVGCMSCSKEYEMDYEKSLESYQ
HKLSVGFAQFEMKFSLLPASLVSMMLLFLCNLGLQFIGNDIVRGFTSQECPDDKNLTTYS
FLVHRLLHKALLKTAREISFSASRYTIACSLSFHGGEIRSKCLDTWWYYLQGLLLSLQGV
RAALRTTHDSLNDDRVSKLLTILDLVEYNLYFTSAWLLRDSRCLLKMVQLLLANEQSPHD
VEIERLKQLLSQFGELIAQNLSSDVDHNHEILEGMANEEYDDIVHSIPGDERWHIIGACL
WHHMSKFIKHKLTTLTNKSKEGSFSGITLGNLNSWVPCLSTVKSDQNDILKNMIELISKN
FTSLLTIVLAQASSYQLKQLVSFLQYKLDQRLCVATVVWFEQFSKSSEHKKHHADEMYNI
DMCNKGEFETLWNITSNPNLVSECFAHEKVHLLHCFDRKLSKRWTDIYNGTTRPEETCSR
EGALINSSASDTIGSPGKLLRSGRTLVSSEKELATLDDVMPFQKPKEIYRRNGELLEALC
INSVDGRQAALASNKKGIIFFSWEDGMASRDEEDYIWSNSEWPLNLNGWAGSESTPAPTC
VFPGVGLGTNKGAHLGLGGATVGVGSPARPGRDLTGGGAFGISGYAGMGASGLGWETQED
FEEFVDPPATAEHTSTRAFSSHPSRPLFLVGSTNTHVYLWEFGKDRATATYGVLPAANVP
PPYALASISSVQFDQCGHRFATAALDGTVCSWQLEVGGRSNVCPTESSLCFNGHASDVTY
VTSSGSIIAVAGYSSSAVNVVIWDTLAPPKTSQAAIMCHEGGARSISVFDNEIGSGSVSP
LIVTGGKGGDVGLHDFRYVVTGRNKKHSPKGERISDASNTNMLGTVGEQNLNGMLWYIPK
AHSGSVTKITSIPNTSLFLTGSKDGDVKLWDAKRAKLVHHWPKLHDRHTFLQPSSRGFGE
VVRAAVTDIQVIASGFLTCGGDGLVKLVQLQ
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacagcctccaagatggatcctatctctcgtctccctctccctcttttagga
tccgagccgatccctccagctccgaatagattggacccacttggttcctccatcgattgg
attccggactttgccggctatgcgtgggtcgcttatggagcctcatctcttttggtcatc
tctcatttcccttctcctctatcaccccatgaaaccaaattcggacccatatttcgccag
gtactggagctctctggcgatcacttatcagctgtcaatgccgtgtcttggtctcctgta
ttaccgtcggagggcgagcttgctgcagccgcgggcaatcggatatgggtgttttctcac
gatttgggtgcttctcgaggttctttttgttggaggcagaattcagtgcttgtgcaatct
ctgaaggttgaggccattcagtggacggggtcaggagatggaattattgcttgtggagta
gaggttgttttgtggaaaaacaccaacaagtcctgggaaatagcttggaagttcaaaccg
gatgtaccccaaactcttgtttctgcaagctggtctactgaggggccatttgcaacggca
cctcatgccaggatatcgaagacagaaaatatgctgactgagagagcttgcagatctgtg
ctggtaagtcagagtgaaggggaatatgggcatgtgaaaattgagttgtgtcatcctcta
cctataactgtaattcaatggaggccttcagttaatgggcctgaaatcggcaagcattca
ccaaggaatgtgcttctgacatgctgcttggatggaactgtgagattgtggagtgagact
gaaaatggaaaggtcagaaaatttagtaaggatgtaaataataaaaagtcgatgagaagg
catttttctgttgctgctgtcgtagagataaatcaggcattgaaaggaactcttggcatg
gatttatttgtaacatgggcaaccgagattagaggtatgtgccaaccttttgaagtaact
aagaaagttcaatcctcagtaggattcgaacaaaacaaggctggcaactgtgagtggcta
ataagtttgggtccaggatcactggttactttttgggctgtccattgtcttgatgatgta
tccccattaagattccctcaagtcacattgtggaagaagcaagagctcaaaggatttgaa
gtgggacgtcattatactgatggctgtacaaacttgagtaacaagtttctcctcaagaaa
gttgtaatatcaaggattcaccaatctggttccccaagtatatgttctttgattcagcta
ttgccttgtaattccttggtgtggtcacttttatctgctcacacattaactgacgtaggg
gatgcatcctttgaccaaaaaaggttagaaagtttatcctcgtgttcatttagcagtcaa
ttgaatttaagtggtcacgctggaaaaatcttgcatgttgctgtgcatccatacaattgt
gaggtcaaaatagctgcttccttggactctaacggcttgcttcttttttggtcactatct
agtatctccaactgtgccctaggttctccaacacttactccaacctgggaactttgtgga
aaacttgtaactcaagattcatgctccaaatatacaagtgtgcagtgggcaccatcaata
ttggatgaagagttgattcttctcatgggacatgcaagaggaattgatttttttgctgtt
aggattagccaaagtgatgaagaaaatactgaatgtcactacttatgtaccatccctttc
accggtcatggtccttttgagaatggtccgaccaatatattttctattttgttgccttct
gattgtaatataacttataaattcaataaatttatgttattagggatatggatgaaagga
tttcaggcattatcttgggaaatcaccctacatgcttatgatatctctgggactggatta
cattgcaaatgtgatattgataatgaaaatagagctgagctcagcatattgacatttgaa
agtgcttttggaagcaaaaaatattgtgttagtataatcccctgctcatcacagctacct
aattctcaaatccatgatcagattacaagttttgctgttgtgcaccaaggaacttttgtt
cctgtgcagcaaaaattagcttcatcaggtgagccatctacccctgcatatattatggct
actggctctgctgatggttgtttgaaactgtggaaaagtaatgtaggaaaaccatcaatc
ttccacgtgccatgggagcttgtttgtgttgttgtcgcacatcaaggcccaattactgct
ttgtctttgactgattgtggtaggaagattgcaacaattagcaaggacaaccttgaatgt
aaaaccagcagtgttcatttatgggagcttgcataccttggtgcagggatccttttgttt
gaagatgaactgtcctttgaaagcaatatcattgcagtggactggctaactttaggaaat
ggtcagttcttacttggaatttgtttgcagaatgaattgtgtgtgtactccctgaagcgt
tttggctgccacaccttgttagagaccacaaaatccttggataccaaaacttggatatgc
attggaatctctcgtactcttccttctaactgtggcttcctctgggggccaaggaccaca
gcgatagttttacatgatcgttacttttgtatagttagtccatggttattccttggggtt
acaaaccatgatgctatgtgcaacactcattacatcggagaaactaaaactcaccatgtc
aatgggactaataccaacatttctgttgctgtttttgctgataaatgttgcggtatcaaa
acattaccagatgatatttatgaaagaaaatatagaccaggatcactcggtctaattagc
atgccagatgtagttgataaattgtgtggatcactgtcttcttttcatcctcaggccctc
ctctttaatatatattcaggcaagtggaaacgtgcatattcagctttgagtcatctcatt
gaacatctttcgtctgataaaaagagctctgcaaactcaacctatactattccagagatc
cctttgtcagattattttgaaggggttataaaaacttcaactgataaaggagttcagtgg
agtacaaattccctatcatcccaatttaaggaaggtgtttcacaatgggccttcaattgg
gactctataagtaatgacaactcattcgttccatcgtccacgaagtctgaattcagcagc
tttattgagcctcttgagaagttatatgaattagcagggctaaccagcatggagaaaaca
caaactcttgcaattgtggatcttctaggtgaaatcagtaataaatcttcttcatctgct
tatgaaagtcttgacgagcctgggagaagatattggattgcttggaggtttcaacaattg
caatttcttcggcgtgagagtagatcagcatctatggaagagctggccattgactcaaaa
ttgattggatgggcctatcactctgattgtcaggaaattctattgaattcagttagttct
aatgaaccaacttggcaggaaatgcgaagtttgggtgttggaatttggtttactaataca
acacagctgcgtacaaggatggagaaactggcgagatctcaatatctgaagaaaaaagat
cccaaggactgtatgcttctgtatgtcacacttaatagaattcaagttttagctggcctt
tttaaaattagcagggatgagaaagataaacccttggtgggattcctttcacgcaatttt
caggaggaaaaaaataaggcagcagctttgaagaacgcctacgttttattggggagacat
caactagaattagctgttgctttctttctgcttggtggtgattcttattctgctgttagt
gtttgtgccaaaaaccttggggatgagcagcttgcactggtaatttgtcatctagttgaa
gggcgtggtggacctcttcagcaacacctaattacaaagtttatgcttccatctgccatt
gagaagggcgacacttggcttgcaagcattcttgagtgggaattaggaaactacactcgg
tcctttctgaacatgcttcgtttggactctaattccgtaactggtccaccgtttctttca
agtaaacatattgctttactagacccaagcgttggtatgtactgtctactgttagcaacc
aaaaatagcatgaagaaagcagttggagtgcaatctgctgagatcctttgccagcttgca
accttgatgatggctacttctttgaacagacgtggtcttcctcttgaagctttggaacac
gtgtcaacctgtgggagcattactgatgtttctgatggaactaataaggttgatattcag
tgttttgatactataagcaacatctgtcagaaatctcccggagattcctccagttggctc
tctgttgaatttgcagttcatctggagcatcaagtaaaattagatttggcagctcaatac
ttctcaaaattgatacggaagcatcccagctggccaactataaattttgaatctgttgga
tgcatgtcatgttcgaaggaatatgagatggattatgagaaatctcttgaaagttatcag
cacaagttaagtgtggggtttgcacagtttgaaatgaagttttcactgcttcctgcctct
cttgttagtatgatgttactctttctgtgtaatcttgggctacaatttattggaaatgat
atcgttcgaggatttacttctcaagagtgcccggatgacaagaacctgacgacttatagt
ttcctcgtacatcgcctcttgcacaaggcactactgaaaacagcacgagaaatttctttt
tcagcttcacgatatactattgcttgcagtttatcttttcacggaggtgaaattaggtca
aagtgtttagatacttggtggtactaccttcagggtctcttattatcattacagggtgta
agagctgctttgagaactacgcatgattctctcaatgatgatcgtgtttccaagcttctg
accattcttgatttggttgaatataacttgtatttcacatctgcttggctactgagagac
tcaagatgtcttctcaaaatggtgcaactgctcctggctaatgaacaatctcctcatgat
gttgagatagaacgtctgaagcaacttctctctcagtttggggagttgatagctcaaaat
ttatcgtctgatgtagatcataaccatgaaattttggaaggcatggctaatgaagaatat
gatgatattgtgcattcaattccaggagatgaaagatggcacataattggggcttgtttg
tggcatcacatgtccaaattcataaaacataagctgactactttaactaataaatctaaa
gagggtagtttcagtggtatcactcttgggaacctcaattcctgggttccctgtctttca
accgttaaatctgatcagaatgacattttaaagaacatgattgaattgatctcaaagaat
tttacttctttacttactatcgtccttgctcaggcttcttcttatcaactaaaacaactg
gtgtcatttctgcaatacaagctagatcagagattgtgcgtggcaaccgttgtttggttt
gaacagtttagcaagtcttctgagcataagaagcatcatgctgatgagatgtataatata
gatatgtgtaacaaaggggaatttgaaacattatggaacattacttccaatccaaatctg
gtatcagaatgctttgcacatgaaaaagttcatctgttgcattgttttgatcgtaaactc
tcgaaaagatggactgacatttataatggcaccacaaggccagaggaaacttgtagtcgt
gaaggtgcacttattaatagttcagccagtgataccattggatcccctggtaaattactt
cgcagtgggagaacacttgtcagttctgaaaaggaattggcaacccttgatgatgtcatg
ccgtttcagaaacctaaagagatatataggaggaatggagagcttttagaggcattgtgt
atcaattctgttgacggaagacaagctgcacttgccagtaataaaaagggtataattttc
tttagctgggaagatgggatggcctccagagatgaagaggattatatctggtcaaattct
gagtggcctctaaatctaaatgggtgggcaggctctgagtcaacaccagctccaacatgc
gtatttcctggagtgggtcttggtaccaacaaaggagcacacctagggctgggtggtgca
actgtgggtgttggttcacctgcaagaccggggagagatttgacaggaggtggagcattt
ggtatttctggttatgctggtatgggtgcttctggcttaggttgggaaacacaagaggat
tttgaggaatttgtagatcctccagctacagcagaacacacaagcacgagggctttctcc
agtcatccttctaggcctcttttcttggttggttctaccaatacacatgtatacttgtgg
gagttcgggaaggacagagctactgcaacgtatggtgtcttgcctgcagcaaatgtgcct
ccaccatacgctctagcttcaatatcatctgtgcagttcgaccaatgtggacacagattt
gctactgctgcactagatgggacagtttgctcatggcagttggaggttggaggaagaagc
aatgtctgtccaacggaatcgtctttatgctttaatggccatgcatcggatgtcacttat
gttacttccagtggatcgataatagctgtggctggatatagctcctctgcagttaatgta
gtcatatgggatacactggctccaccaaaaacatcacaagcagccattatgtgtcacgaa
ggtggtgctcgctctatttctgtgtttgataatgaaataggaagcggttctgtttctcca
ctcatagttactggtggaaaaggtggagatgtaggacttcatgacttccgatacgtagtc
acgggtaggaataagaaacactctcctaaaggtgaaaggattagcgatgcttcaaatact
aacatgctaggtaccgttggtgaacaaaacttaaacggaatgctgtggtacataccgaag
gctcactctgggagtgtcactaagataacgtctatcccaaatacgagtttgttcctgacc
ggaagtaaagatggagatgtgaaactttgggatgcaaaaagagctaagttagtgcatcat
tggccaaagttgcatgatagacacacttttcttcaaccgagctcccgtggttttggtgaa
gtagttcgggctgctgttactgatatacaagttatcgcaagtggatttcttacctgtggt
ggagatggcttggtcaagctggttcaacttcaatag
DBGET
integrated database retrieval system
