KEGG   Cucumis sativus (cucumber): 101204877
Entry
101204877         CDS       T02486                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03022  Basal transcription factors
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101204877
  09124 Replication and repair
   03420 Nucleotide excision repair
    101204877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101204877
   03400 DNA repair and recombination proteins [BR:csv03400]
    101204877
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101204877
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101204877
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 101204877
NCBI-ProteinID: XP_004147953
UniProt: A0A0A0L4F5
LinkDB
Position
3:complement(2736755..2739125)
AA seq 70 aa
MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF
REQISYEKPT
NT seq 213 nt   +upstreamnt  +downstreamnt
atggttaatgctattaaagggatgttcatctcctgtgacatacctatggcacaatttatc
atcaattacaatgcttccttgcctgcatcccatagatttatcatccatatactggataac
actcacatgtttgtgcaaccacacgtagctgacatgattcggaacgccatctcggaattt
cgagaacagatttcttatgagaaacctacttga

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