Cucumis sativus (cucumber): 101205444
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Entry
101205444 CDS
T02486
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101205444
04121 Ubiquitin system [BR:
csv04121
]
101205444
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101205444
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101205444
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101205444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-RING-like
zf-HC5HC2H_2
zf_RING_Vps8
Prok-RING_4
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
101205444
NCBI-ProteinID:
XP_004143127
LinkDB
All DBs
Position
6:12481372..12482832
Genome browser
AA seq
414 aa
AA seq
DB search
KAPFFFSSSSSFPQAPFSLLFLLLSLQFSVSVRSEAMSTGTASYWCYRCNRFVRAWAQDS
ITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIHTLDQDSFQSPRLSTRRSRRRLGDRS
TFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGSGLRPVPATMSEFLMGTGFDRLLEQ
LAQLEINGFGRSENPPASKAAVESMPTIEILESHVDSDSHCAVCKEAFEIGTEAREMPCK
HIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGVSDRVVDEETVGLTIWRLPGGGFAV
GRFSGGRLAGERDPPAVYTEMDGGFNGNGVPRRVSWASRRSRGRESRGIGRTFRNIFSFF
GRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRYLRRQNRAWVLENQNENGRW
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
aaagcccccttttttttttcttcctcttcttcgtttccacaagccccattttctttactt
ttcctccttctttctctccaattctctgtttcagtcagatctgaggctatgtctaccgga
accgcctcctattggtgttaccgctgcaaccgtttcgttcgtgcttgggctcaggactcc
atcacttgcccttactgtgacggtggctttgttgaagctattgaaaccgcttcttctctt
ccgccctccaatctccaccgtcgcttatctccctctgcgatccatactctggatcaagat
tcttttcagtctcctcgtttgagtacccgccgtagtcgtcggagacttggggatcggtcc
acttttaaccctgttgttgttcttcgtggttctgctgatgccggggatgtcgttggcggt
ggggaaaggaatagctttgatatttactatgacgatggtgctgggtctgggcttcgccca
gttccggcgaccatgtctgagtttttgatggggactgggttcgatcggttgctcgagcag
ttggctcaactcgagatcaacggctttggtagatctgaaaatccgccggcgtcaaaagct
gctgtggaatcaatgccgacgatcgagattttagaaagtcatgtggattctgattcgcac
tgcgccgtgtgtaaagaagcctttgaaatcggaactgaagcccgagaaatgccgtgtaag
catatatatcactccgaatgcataatcccttggctttccatgagaaattcctgtccggtc
tgccggcacgaattgccctcggagcgtgtgtctccggctggtggggtttcagatcgggtt
gttgacgaagaaaccgtagggttaacgatctggaggctccccggtggtgggtttgccgtc
ggacgattctccggtggaagattggccggcgagagagacccaccggctgtgtacaccgaa
atggacggtgggttcaatgggaacggagttccaaggagggtttcgtgggcttcgagaaga
agcaggggaagagagagccgaggaattggacgaacatttcggaacatattttccttcttt
gggagatttaggtcgtcgagttcatcttcttcctcgccttcaaatgaatctgagtctgta
agtagaagccatagccattcgagttcttcagttttcagcagatacttacgaaggcaaaac
agagcttgggtgttggagaaccagaatgaaaatggcagatggtga
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