| Entry |
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| Name |
(RefSeq) exosome complex exonuclease RRP46 homolog
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| KO |
| K12590 | exosome complex component RRP46 |
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| Organism |
csv Cucumis sativus (cucumber)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csv00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101205616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csv03019]
101205616
Messenger RNA biogenesis [BR:csv03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101205616
|
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:20336626..20340144
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| AA seq |
243 aa
MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI
NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP
EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMNSS
KAG |
|---|
| NT seq |
732 nt +upstreamnt +downstreamnt
atggagatagacagagatgatggtcgtacccctaaccagttgagaccacttgcttgttct
tgcaacgttcttaatcgtgctcatggctccgccagttggtcccaaggtgatacgaaggtt
cttgctgctgtctatggacctaaagctggaacgaagaagaatgaaaatcctgagaaggct
tcaattgaggttatatggaaacctaagacagggcaaattggaaaactggaaagggagtgt
gagatgatattaaagcggacattgcagagtatttgcatattaactactaatcccaatacc
accacatctattattgttcaggttattcatgatgatggagctcttcttccttgtgctatt
aacgcatcatgtgctgcccttgtagatgccggaattcctttaaagcatcttgctgttgcg
atttcgtgttgtttgtctgagaatggatatgttattttggatccaaccaagatagaggag
gagaaaatgaaggcctctgtgcatttggtcttcccaaatgcacctgtctcagtagttcct
gaaggatctacacaaggtgtaggtgaaccactggagcatggaataatcacatctgtaact
cagggtgcaatgtcagtggacgattatattcactgcctggaacgggggcgtgctgctact
acaaaaatgtctgcttttctgaggagaagtttgcagccccaactcccaatgaattcctca
aaagctggctga |
|---|
