Cucumis sativus (cucumber): 101205739
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Entry
101205739 CDS
T02486
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101205739
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101205739
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101205739
NCBI-ProteinID:
XP_011655861
UniProt:
A0A0A0KRG9
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Position
5:28428607..28433563
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AA seq
515 aa
AA seq
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MFPRVLTTLFIWMVASSISCVSSSSFNLTLPHQHPDPDSVADELQRTVNASVWRRQMLSI
ESKDQTFSCLTGNPIDDCWRCDPNWAANRQRLADCGIGFGRDAMGGKGGKIYIVTDSSDL
DPTNPTPGTLRHAVIQFEPLWIIFSADMTIRLKYELIINSFKTIDGRGANVHITGGGCIT
IQYVSNVIIHNVHVHHCKPSGNANIRSTPTHVGHRGLSDGDGISIFSSRKIWIDHCSLSY
CTDGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDRYVQDSGMQVTIAFNHFGEALVQRM
PRCRHGYIHVVNNDFTAWQMYAIGGSAQPTINSQGNRYTAPVDPNAKEVTRRLDAAETEW
AGWNWRTDGDILVNGAFFVPSGAGLSTQYGKASSVEPKSVALINQLTMNAGVLGAPRYNG
GEGIVYPGFSGGSGGNGDEGYGGNTVINNSPIYENGGGSGGYGNGNGNDDYFGMIFKANG
HRTFPIFSSLNYLCTLLIIFLLYIVTNYSSTLLSL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcgtgttcttaccactctcttcatatggatggttgcttcttcaatctcttgt
gtctcttcgtcttctttcaatcttacattaccccatcaacatcctgaccctgattctgtt
gctgatgaacttcaaaggacagtgaatgcatccgtatggagaagacaaatgctgtccatc
gaatcaaaggatcaaacattctcttgtctcaccggaaaccccatcgacgattgctggcgg
tgcgacccaaattgggcagctaaccgccagcgattggccgactgtggtatagggttcggg
cgagacgccatgggtggcaaaggtggaaagatctacatcgttaccgactcgtccgatttg
gatccgacgaacccaactccgggaactctccggcacgctgtgatccaattcgaaccactg
tggatcatattctccgccgacatgactataaggctgaaatacgaacttatcatcaacagt
tttaaaacgatcgacggccgtggcgccaacgtccacatcaccggcgggggatgtatcacc
attcaatatgtgtcgaatgtcatcatccacaacgtccacgtgcaccactgtaaaccctcc
ggcaatgccaatataagatcgactccaactcacgtgggtcatcgaggactatcggatgga
gatgggatctcaatatttagctcgagaaagatatggatcgaccattgttcattgtcgtat
tgtaccgatggattaatagatgcaataatgggttcgacgggaataacgatatcaaacagc
tacttctcgcaccatgacgaggtgatgttgttgggacatgacgatcggtatgtgcaagac
tcggggatgcaagtcaccatcgccttcaaccactttggcgaggcgttggtccaacgtatg
cctcgatgtagacatggctatatccatgtcgtcaacaatgacttcactgcttggcaaatg
tatgccattggaggtagcgctcaacccactattaacagtcagggtaatcgttacaccgct
cctgtggaccctaacgccaaagaggtgacgagacgtttggacgcggcggagacagagtgg
gcggggtggaactggcggacggacggcgatattttggtgaacggtgcgttttttgtaccg
tccggcgccggacttagcacccagtatggtaaggcatccagcgtggagcctaagtcggtg
gctctcatcaatcaactcactatgaacgccggcgtcttgggcgctccaaggtataatggc
ggtgaaggaattgtctacccaggatttagcggtggaagtggtggaaatggtgatgaggga
tatgggggtaatactgttatcaataatagtccaatttatgaaaacggtggtggtagtggt
ggttatggtaatggtaatggtaatgatgactacttcggaatgatatttaaagctaacggc
catagaacatttccaatattttcctccctaaactacttgtgtactcttctaattatattc
cttttgtatatagtcacaaattatagcagtactttattatctttatag
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