Cucumis sativus (cucumber): 101205767
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Entry
101205767 CDS
T02486
Name
(RefSeq) squalene synthase 12
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00100
Steroid biosynthesis
csv00909
Sesquiterpenoid and triterpenoid biosynthesis
csv01100
Metabolic pathways
csv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101205767
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
101205767
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csv01006
]
101205767
Enzymes [BR:
csv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101205767
Prenyltransferases [BR:
csv01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101205767
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
101205767
NCBI-ProteinID:
XP_011649260
UniProt:
A0A0A0LIW1
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All DBs
Position
2:12698139..12703735
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AA seq
417 aa
AA seq
DB search
MGSLGAILKHPDDFYPLLKLKIAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKP
ELRNAVCIFYLVLRALDTVEDDTSIQTDIKVPILKAFHCHIYNRDWHFSCGTKDYKVLMD
EFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHAAELEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKL
EDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSNDPNASKTLSRI
EAIQKTCKQSGILNRRKLYVVRSEPMFNPAVIVILFSLLCIILAYLSAKRLPANQSV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggggagcttgggggcgattttgaaacacccagatgacttttatccacttttgaaactg
aaaatagccgctagacatgcggagaagcagatcccacctgagcctcattggggattctgc
tataccatgctgcataaggtctcaagaagttttgcactcgttattcagcagcttaagccc
gagcttcgcaatgctgtgtgcatattttatcttgttctgcgagccctcgacactgttgag
gatgatacaagcatacaaacagacattaaagtgcccattctgaaagcttttcactgtcac
atatataaccgtgattggcacttttcatgtggcacaaaggactataaagttctgatggat
gagtttcatcacgtttcaactgcgtttctagaacttgggaaagggtaccaggaagcgatt
gaggatatcacaaaaagaatgggtgcaggaatggctaaattcatttgcaaagaggtagag
acggttgatgattatgatgaatattgccactacgtagcgggacttgtcggactaggttta
tctaagctgttccatgctgcggagttggaggatttggcacctgattctctttcaaattct
atgggattgtttctccagaaaaccaacattatccgagattacttggaggacattaatgag
attccaaagtcccggatgttttggcctcgtgagatttggggcaaatatgctgataaatta
gaggattttaaatatgaggagaattcagtcaaggccgtgcaatgcctcaatgatttggtc
actaatgctttgaaccatgtggaggattgtctgaaatacatgtccaacttaagagatctt
tccatatttcggttttgtgctattcctcagattatggcaattggaactctagcattatgc
tacaataacgtagaagtcttcagaggggtggttaaaatgcgccggggtcttactgcaaag
gtcattgatcgaacgaaaacaatggctgacgtctatggagctttctttgatttttctgtt
atgctgaaggctaaggtcaacagcaatgatcctaatgcttctaaaaccctgagcagaatc
gaggcaatacagaaaacctgcaagcagtcgggaatcttgaacaggaggaaattgtatgta
gtcagaagtgagccaatgttcaatccagctgtgattgttatacttttcagcctattatgc
atcattcttgcttatctctctgccaagcgattaccagccaaccaatctgtatga
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