Cucumis sativus (cucumber): 101205812
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Entry
101205812 CDS
T02486
Name
(RefSeq) protein SPA1-RELATED 3 isoform X1
KO
K26557
protein SPA1-related 3/4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101205812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101205812
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
101205812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Pkinase
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
PK_Tyr_Ser-Thr
Beta-prop_DCAF12
WD40_RFWD3
WD40_like
NBCH_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
101205812
NCBI-ProteinID:
XP_004141223
LinkDB
All DBs
Position
4:complement(23882394..23889364)
Genome browser
AA seq
850 aa
AA seq
DB search
MFVCWLMCCFKWITMEGSSDHLRNLDDISGVCEEDILADPYLRSHKWSDISLRQWLDKPG
RSVDALECLHIFRQIVEIVNIAHAQGIVVHNVRPSCFVMSSFNHVTFIESASCSDSGSDS
LEDGINSQMAEVKTSSSPFPSSLGSEGFRSVMTPINALSETSCMQSSSIYAAQASLNEGF
GKFRKKDRRHIEETEDKVQSFPMKQILAMETTWYTSPEEASDSPSSSASDIYRLGVLLFE
LFCSFSSREEKNRTMSSLRHRVLPTQLLLKWPKEASFCLWLLHPEPTNRPKLSELLQSVF
LNEPKDDLEEREAAIKLRKKIEEQELLLEFLLLMQQRKQEAAHKLQDTISFLCSDIEQVM
RHQTNFKKNIGSHTDLVKDNHLPLNLPSMPPVRNTDSAALGSRKRFRPGILTHDIEACGD
NLDHCSKTSSENDNEQGVLFKSSRLMKNFKKLELAYFLMRGRVNKPSRQFVKHSSVSSDG
RGSVVLTERSSVNNLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNS
SNLVCSLSFDRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNR
YIKSQIASSNFEGVVQVWDVTRSQVVTEMGEHERRVWSIDFSSADPTILASGSDDGSVKL
WSINQGISIGTIRTKANVCCVQFPVDSGRSLAFGSADHKIYYYDMRNIRVPLCTFTGHNK
TVSYVKYIDSSTLVSASTDNTLKLWDLSMSTSRVVDSPVQSFTGHMNIKNFVGLSVSDGY
IATGSETNEVFVYHKAFPMPALSYKFQIDPLSSHEMDDSAQFISSVCWRSQSSSLVAANS
TGHIKILEMV
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtgctggcttatgtgctgctttaagtggataacaatggagggatcatccgat
caccttaggaacctggatgatatatctggggtttgtgaggaagatatacttgccgaccct
tatctgcgttctcataaatggagtgatattagtttgaggcaatggttggataagccagga
agatcagtggatgctcttgaatgccttcatatatttaggcaaatagtggagattgttaat
attgctcatgctcaaggcattgttgttcacaatgtgcgtccttcatgctttgtaatgtct
tctttcaaccatgtaacctttattgagtcggcatcatgttcagattctggctctgattct
cttgaggatggcattaatagtcaaatggcagaggttaaaacatcatcttctccctttcca
agcagccttggaagtgagggttttcgatctgttatgacccctataaacgctttgtctgaa
actagttgcatgcagtcaagttcaatatatgctgcccaagcatccttaaatgaagggttt
gggaaatttagaaaaaaagatagaagacatattgaagaaacagaagataaggtgcaatcg
tttcccatgaaacagatattggccatggagactacatggtacaccagcccagaagaggct
tcggatagcccaagttccagtgcttcagatatctaccggttaggagttcttctttttgag
ttattctgctccttcagctcgagagaagagaagaatagaactatgtccagcttgaggcat
agagtgcttcctactcaattgctgttgaagtggccaaaagaagcttcattttgcttatgg
ttactgcatcctgagccaaccaatcgacctaagctaagtgaattattgcaaagtgtattt
ctcaatgaaccaaaagatgatctagaagaacgtgaagcagcaatcaagcttcgaaaaaaa
attgaagagcaggagttactgctagaattccttttgctcatgcaacaaagaaagcaggaa
gctgctcataagctgcaagataccatttcatttctatgcagtgatattgaacaagttatg
aggcaccaaactaatttcaagaaaaatattgggtcacacacagatcttgtgaaggacaat
catttgccattaaatctcccttcaatgcctcctgtcaggaatactgattctgctgctctg
ggatcaaggaaacgatttagaccaggaattttgacccatgatatagaagcatgcggtgat
aatcttgatcattgctcaaagacaagttcagagaatgataacgaacaaggcgtacttttt
aagagttctcgattaatgaagaactttaagaaattggagttagcatactttttgatgaga
ggtagagtaaacaagccatcaaggcagtttgttaaacactcatcagtaagtagtgatggt
agggggtccgtagttttaactgaaagaagttcagttaataatttggcttcaaaagagagt
tgcaatgacaatagacaaggtgggtggataagtccattcctggaaggtttgtgcaagtat
ctatcctttagcaagttaaaagtaaaggcagacttgaagcaaggagatctattgaattcc
tccaacttagtgtgttctctcagttttgatcgtgatggagaattttttgccacagctggt
gttaataggaaaattaaagtgtttggatatgactcaattgtgaacgaagaccgtgatatt
cattaccctgttgttgaaatggccagcaggtcaaaactaagcagtgtttgttggaatcgt
tacatcaaaagtcaaattgcttcaagtaattttgagggtgtagtgcaggtatgggatgtc
acaagaagtcaagtagtcactgaaatgggagaacatgagcggcgtgtatggtccattgac
ttctcatcagcagatcctacaattttggcaagtgggagtgatgatggatcagttaagctc
tggagtatcaatcagggtataagtattggaacaatcagaacaaaagccaatgtctgctgt
gtacaatttcctgtggattctggtcggtcacttgcatttggttcagctgatcacaaaatt
tattactatgacatgcggaatataagagtacctttgtgcaccttcactggacataacaaa
actgtgagttacgtcaagtatatagactcaagcactcttgtttctgcatccacggataac
actttgaagctctgggatttgtccatgtccacatcccgggttgttgattctccagttcag
tccttcacaggccacatgaatattaagaactttgtggggctgtccgtttctgatggttac
attgctacaggttcagagacaaatgaggttttcgtctaccacaaagcctttccaatgccc
gcattgtcgtacaagtttcaaatcgatcctctttcaagtcatgaaatggacgactccgca
caatttatctcttcggtttgttggcgaagtcagtcgtcttcattagtagctgcaaactca
actgggcatatcaaaattttggaaatggtttag
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integrated database retrieval system
