Cucumis sativus (cucumber): 101205889
Help
Entry
101205889 CDS
T02486
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101205889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101205889
03009 Ribosome biogenesis [BR:
csv03009
]
101205889
04131 Membrane trafficking [BR:
csv04131
]
101205889
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101205889
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101205889
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101205889
Membrane trafficking [BR:
csv04131
]
SNARE
SNARE associated proteins
Others
101205889
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101205889
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101205889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
AAA_lid_PRS2_C
DUF815
TsaE
ResIII
AAA_24
Vps4_C
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
101205889
NCBI-ProteinID:
XP_004138100
UniProt:
A0A0A0LP36
LinkDB
All DBs
Position
1:complement(776897..782151)
Genome browser
AA seq
819 aa
AA seq
DB search
MTDPTGSSASDKGQELSSSSDQNNTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLHP
ATMEKLQFFRGDTILLKGKKRRDTVCIVLADEQCEESKIRMNKIVRGNLRVRLGDIVSVH
QCPDVKYGNRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEF
KVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPL
RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESES
NLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIII
GATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLSIHTKNMKLAEDVDLERVARDTH
GYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGSSNPSAL
RETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK
TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT
QRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY
IPLPDESSRLQIFKACLRKSPVAKDVNLSALAGYTHGFSGADITEICQRACKYAIRENIE
KDLERERKQGENSEAMEEDEIDDVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQ
SRGIGSEFRFPDRNDNVAAGAADPYASTMGAGDDDDLYS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccaacaggttcttcggcttcagacaagggccaggaactctcttcttcatcg
gaccagaacaatactaaacgggatttttccactgcaattttggaacggaagaaatctcca
aatcgcttagttgttgatgaggctataaatgatgataactctgtcgtttcattgcatcct
gccaccatggaaaagttgcagttctttagaggagatactattttattaaaggggaagaag
cggagagatacagtgtgtattgtacttgccgatgaacaatgcgaagagtcaaaaatcaga
atgaataaaattgtaagaggtaatctcagagttcgtcttggagacattgtatctgtccat
cagtgtcctgacgtgaagtatggaaatcgggttcatatcctccctattgacgatacaata
gagggtgttactggcaacctctttgatgcatatttgaaaccttacttcttggaagcatat
cgaccggtaaggaagggtgacctgttcttagtccggggtggaatgagaagtgttgagttc
aaggtcatagaaacggaccctggtgaatactgtgttgttgcacctgataccgagatcttc
tgtgagggagaacctgtcaaacgtgaggatgaggagagattaaacgaagttggatatgat
gatgttggaggtgtcaggaagcaaatggctcagatacgtgaattagtcgaattacctctt
aggcacccacaactcttcaaatcaattggtgtaaagcctccaaaagggatattgctatat
gggcctcctgggtctggaaaaactcttatagcaagagctgttgctaacgagacaggtgca
ttcttctttcttattaatgggccggaaataatgtcaaagttagctggtgagagcgaaagt
aatctgaggaaggcatttgaggaagctgaaaagaatgccccctcgattatatttattgat
gagcttgattccattgctccaaagagggagaaaacgcatggagaagtggaaagacgtatt
gtgtcccaacttcttaccttgatggatggcctgaagactcgagcacatgttattattatc
ggagcaactaatagacccaattcaattgaccctgctttgaggagattcggaagatttgat
cgggagattgatattggtgtacctgatgaagtaggacgattggaagttcttagtatccat
acaaagaacatgaaacttgcagaggatgttgatcttgagagagttgcaagggatacacat
ggttatgttggtgctgacctagccgctctttgcactgaagcagcactccagtgtattagg
gagaaaatggatgtcatcgacttggaagatgaaacaatagatgctgaggttttgaattcc
atggctgtatccaatgaacacttccaaactgctttagggtcttctaatccatcagccttg
cgggaaactgttgtggaggttccaaatgtgtcgtgggatgatattggtgggttggaaaac
gttaaaagagagctccaggagactgtccaatacccagtggagcatcctgagaagtttgaa
aaattcggcatgtcaccatctaaaggtgttctcttttatggtccccctggctgtggtaaa
acgctacttgctaaggcaattgccaatgaatgccaggcaaactttataagtgtgaaagga
ccggagttgctgacaatgtggtttggtgaaagtgaggcaaacgtgagagagatatttgac
aaggctcgtcagtcagctccttgtgtactattttttgatgagctcgattctatagcaact
cagcgtggtagttctgttggagatgctggtggtgcagcagacagagtcttgaaccaactt
cttacagaaatggatggcatgactgcaaagaagactgtgttcataattggggcaacaaac
aggccagacattatcgaccccgcactgctaaggccgggacgtctagaccaattaatatac
attccgctccctgacgagtcttctcgtcttcaaatcttcaaagcttgtctgcgaaagtca
ccagtggcgaaagatgtcaatctgtcagctcttgcagggtatacccatggcttcagtgga
gctgatatcactgaaatatgtcagcgtgcctgcaaatatgccattagagaaaatatcgag
aaggatctcgaaagggagagaaagcagggtgaaaactcagaagccatggaagaagacgag
atcgatgatgtctcagagattaaggcagcacattttgaggaatcaatgaagtatgctcgc
cgaagtgtgagcgatgcagacatcaggaagtatcagctctttgctcagaccctacagcaa
tctcgtggaattggttctgagtttcggttccctgatcgaaacgacaatgtggcagcagga
gctgccgacccctatgcttccaccatgggtgctggagatgatgatgatctttatagctga
DBGET
integrated database retrieval system
