KEGG   Cucumis sativus (cucumber): 101205997
Entry
101205997         CDS       T02486                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101205997
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101205997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101205997
   04131 Membrane trafficking [BR:csv04131]
    101205997
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101205997
Membrane trafficking [BR:csv04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    101205997
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    101205997
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    101205997
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_WDR3_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_RIG_2nd WDR55 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 101205997
NCBI-ProteinID: XP_004150601
UniProt: A0A0A0LDB9
LinkDB
Position
3:complement(21550031..21553164)
AA seq 301 aa
MPGQKIETGHQDTIHDVAMDYYGKRVASASSDQTIKITGVSNSATQHLATLTGHQGPVWQ
VAWAHPKFGPLLASCSYDGRVIIWKEGNQNEWSQAHIFDDHKSSVNSIAWAPHEVGLCLA
CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTTPGALVGSALLDPVQKLCS
GGCDNTVKVWKLYNGVWKMDCFPALQMHSDWVRDVSWAPNLGLPKSTIASASQDGKVVIW
TVVKEGDQWEGKVLKDFKTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVSTVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctggtcaaaagattgaaactggtcatcaagacactattcatgatgttgcgatggat
tattatggtaagcgtgttgcatcagcttcatctgaccaaactatcaagatcactggtgta
agcaactcagccactcagcatcttgcaacgcttaccggtcaccaaggacctgtatggcag
gttgcctgggcacacccaaaatttggtcccttgcttgcttcatgttcttatgatggtcgt
gtgataatatggaaggaaggcaatcaaaatgagtggtcgcaagcccatattttcgatgat
cataaatcatctgttaactcaattgcttgggcccctcatgaagtgggtctttgtttggca
tgtggttcatctgatggcaatatctctgtattcactgcaagagcagacggtggttgggac
acctctaggatcgatcaagctcacccagttggagtcacatctgtttcatgggctccatct
accacaccgggtgctcttgttggctccgctttactcgatcctgttcagaagctatgctca
ggcggttgcgacaatacagtgaaggtgtggaagctgtacaatggagtttggaagatggat
tgcttcccagctctccaaatgcacagtgattgggttagagatgtttcatgggctcctaac
cttggtttgccgaaatcaacaattgcaagtgcgtctcaagacgggaaagttgttatctgg
accgttgtgaaagaaggagatcaatgggaaggtaaggttctaaaggactttaaaacccct
gtttggagggtatcatggtcgttaacgggcaatatcctggccgtggctgatggaaataac
aatgtttcattatggaaagaagcagtggatggtgattggcagcaggtttcaactgttgaa
ccttaa

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