Cucumis sativus (cucumber): 101206144
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Entry
101206144 CDS
T02486
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csv03016
]
101206144
Enzymes [BR:
csv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
101206144
Transfer RNA biogenesis [BR:
csv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
101206144
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
101206144
NCBI-ProteinID:
XP_031739624
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All DBs
Position
4:complement(14720071..14727465)
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AA seq
810 aa
AA seq
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MPNNHKSFFFNPLDCMTLDSLPSQTIMAFRTVNTFSVFRSSLSPPLSAFRWSSKLRFSSP
LLRHRYQIFKTGGGRLYSFYSVFENIIEELEAPRRRKRVSATAKMGLVGMGSGEVTEDKL
VNRTLDRGLLLEFKKDSERVLLAVAQKPDGKKNWMVFDQQNGVSSSIKPQQITYIVPGVE
NFDHTEIADFIKKAQDNLDPTLLEFAWLELLEQNKAVTTEELAEMIFGSTEPMESYCTHL
LLSRDELYFTVLQTKGSRSFYGPRPTDQVEELQRKKLAKEAAEKELQEFVDLLKSAKAMP
LKSKPPKSSWTAEEKTRYKVESLESYAIDDCVDDEQRKTAGMILKTMGLVKTASSAVNLL
IDVGYFPRHVNLDLLKLNIRTDHSDGIIAAAESLLLEASDPDEVNRKNLTDLKVYAIDVD
EADELDDALSATRLSDGRIKIWIHVADPARFVQPGSIVDREAMKRGTSIFLPTATYPMFP
EKLAMDGMSLKQGEICNAVTVSVVLHSDGSIAEYSVENSIIKPTYMLTYESASELLSLNL
VEEAELKILSEAATLRLAWRRQQGAIDMASLETRIKVANPEDPEPEINLYVENQADPAMR
LVSEMMILCGEVIATFGSRNNIPLPYRGQPQTNIDVSAFAHLPEGPVRSSAIVRTMRAAE
IDFRKPMPHGILGIPCYVQFTSPIRRYLDLLAHYQVKAFLKGDSPPYSHGQLEGMAATVN
INTKLARRLSSVSLRYWILEYLRRQPKENRYRALILRFIKDRNALLLLVEVGIQASAWVS
LGVQIGDEVQVRVEDAHPRDDVLSLKEIIQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacaaccataaatcctttttcttcaatcctcttgactgcatgaccctcgattct
cttccttcacaaacgattatggcttttcgaactgttaacactttctccgtcttccgctct
tcattatccccgcctctctctgccttccgatggagctccaaactaagatttagttctcct
ctgttaaggcatcgataccaaatttttaagactggtggaggtcgattatattccttttac
agtgtgtttgaaaacattatcgaagagctcgaagctccacgccggcgaaagagagtttcc
gctactgctaaaatgggattggtgggcatgggcagtggagaggttactgaagataagctt
gtgaaccgaacattggacaggggattgttgctggagttcaagaaggattcggagagggta
ttactggcagttgctcagaaacctgatgggaaaaaaaactggatggtgttcgatcagcag
aatggcgtctcatcgtctattaagccacagcaaattacatacattgttccaggtgttgaa
aattttgaccatacagaaattgcagacttcattaagaaagctcaggataacttggaccca
acattgctggaatttgcatggcttgaacttcttgaacaaaataaggcagtgactaccgaa
gaattagctgagatgatttttgggagtacagaacctatggaaagctattgtacgcatttg
ttgttatcaagagatgaattatacttcactgttctgcagacaaaaggttcgcgatctttt
tatggtccaagacctactgaccaagttgaagaacttcaacgtaagaagcttgcaaaagag
gcagctgagaaagaactgcaagagtttgtagacttattgaaatctgccaaggcaatgcct
ttgaagtccaaaccacctaaatcgtcctggacagctgaagagaaaaccagatacaaggtt
gagtctctcgaatcttatgctattgatgattgcgtggatgatgaacaaaggaaaacagct
gggatgattctcaagactatgggactggtgaaaacagcatcatcagcagtaaatcttctc
attgacgtggggtatttccctcggcatgttaatcttgatcttctaaagttgaacattcgg
acagatcattcagatggcattatagcagctgcagaatcacttttactggaggcgtctgat
cctgatgaggttaacaggaagaatctcacagatcttaaggtttatgccattgatgttgat
gaagcagatgagcttgatgatgcattgagtgcaacaagattatcagatggtcgaattaaa
atatggatccatgttgctgatccagctagatttgttcaaccagggagcatagtggacagg
gaggccatgaaaagaggaacttctatatttcttccaacagccacataccctatgtttcca
gagaaactagcaatggatggaatgagtttaaaacagggagagatttgcaatgcagttact
gtatctgttgtccttcattctgatggaagcattgcagaatactctgtggaaaactcaatc
atcaaaccaacttacatgctgacatatgaaagtgcatcagagctgcttagtttgaacttg
gtagaggaggctgaacttaaaattctatctgaggctgcaactttgcgattagcatggcga
agacaacagggtgcaattgacatggcttctttggagacacggatcaaggtagcaaatcca
gaagacccggagcctgaaatcaatctctacgtggaaaaccaagctgaccctgccatgcga
cttgtttctgaaatgatgatcctatgtggggaagttatagccacttttggatctcgcaat
aacattccgttaccctacagaggacaacctcaaacaaatatagatgtatctgcatttgct
catcttccagaaggacctgttaggagctctgcaatagtcagaacaatgcgagctgctgaa
attgactttaggaagcctatgccccatgggattttgggaattccttgttatgtccaattt
acatctcccatccgtaggtatttggatctgcttgcacattatcaggttaaggctttccta
aaaggcgactctcctccatactcccatggtcaactagaagggatggcagcaactgtaaat
ataaatactaaattggcaaggaggctctcaagcgttagtcttcgttattggatactagag
tacttgagacggcaaccaaaagaaaatagatatcgggctttgattcttcggtttattaaa
gatcgaaatgcattgctgctgttggttgaggtgggcattcaagcatctgcatgggtgtct
cttggagtacaaattggagatgaagtacaagttcgagtggaggatgcccatccacgtgat
gatgttctttctctgaaggagatcattcagtag
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