KEGG   Cucumis sativus (cucumber): 101206167
Entry
101206167         CDS       T02486                                 
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
  KO
K03093  RNA polymerase sigma-I factor
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101206167
Transcription machinery [BR:csv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     101206167
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2
Other DBs
NCBI-GeneID: 101206167
NCBI-ProteinID: XP_004148429
UniProt: A0A0A0LLW1
LinkDB
Position
2:20147294..20151580
AA seq 560 aa
MMGTSFRPNLRWGFQIQTHSLKNSPSKLSPHASKGREAAFNSGRLSFFSSICEEGESIPR
ETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSL
PTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSF
HDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKIASRLLTTRA
VKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIASM
SCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALG
VLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLN
HSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPE
ETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEK
KAMTKLKNEETVKHLSHYLD
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgatgggaacaagttttaggccaaatctcaggtggggttttcaaattcagactcattcc
ctcaagaattccccttccaagctttccccacatgcctctaaaggcagggaagccgccttt
aattcaggaagactttccttcttctccagtatttgtgaagaaggagaatctatccctaga
gaaaccttgaaaacatacacttgcttgtctgaagctccacaaacctcggccaatgatctg
ttaaatttggaagagatcgagatgaacagtggggcaaagtcacttggtcctatgcattat
gggattaaaagtaccaggccatctaaggtagaggacaatttttcttcctgtacgagcttg
cctactggcaaggcgtcaccttttggcatcttaatggaaaaccttgatgttttggaggaa
acttttactgaatcaggcatgctcagcttggaaagagatattgtgctgcaactaacaaaa
cttggagctttggagttttttaatacctgtctatctaggactcttaaaacttcaagtttt
catgattcgtcaggcttacccattgagggcggtgaagatcacaatgtaaaccagaaaacc
aatgaccagaatgacaatgtcacagtttactctgcaaaaaaagcaggaagaagatcagta
aaaaagagagcaatggataatgctgataaaattgcttcccggctgctgactacaagagct
gttaaagaaaaaatccatagatcgactgtattttcgagaaaaaaatcatctaattcaagt
aaaagaagactgattgttgcaataaatgaagctgaaatgtccacaggggttaaggtagtt
gcaaatttagaaagaattagagaaaccttagaaaaggaatctggaagaatagcaagcatg
agttgttgggctgaagctgccagtgttgatataaaggacctgcagaaacagttacaattt
ggttcgttctgccgggatgagcttttaaggagcactaattcattagtcgtgttcctggca
aagaaataccgatgctctgggttaccaatggaggacttggttcaggcaggagcccttggt
gtgctgcaaggtgttgaaaggtttgaccctaaaaggggttttagaatctcaacatatatt
caatactggataaggaaatcaatgtcaagagttgtggcacggaattcaaggggaattcaa
attccaaggtcattaaccaaggcaataaatcagatacaaaaagcacgaaaagtgttgaac
cacagtggtaggagatattcggatgacgatatagcaagggctactggacttcctttagcc
aaggttagagttgccagcaactgtttaaaagttgtgggttcgaatgatcagaagatgggt
gatggagtaaatatgaaatatatggaatttacagctgatatgtcaatacagagcccagaa
gagactgtgaagcgaaaactaatgaagaaagacatctttaatattcttcaaaggttggaa
tcaagggagaggcaggtcctggtgctgcgttacggacttgtggattttgaacccaagtca
ctcgaggaaattggaaaacttctgcacataagcaaggaatgggttcgaaaaatagaaaag
aaagctatgacaaagctgaagaatgaagagactgtgaagcacttgagccattacttggat
tga

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