Cucumis sativus (cucumber): 101206167
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Entry
101206167 CDS
T02486
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101206167
Transcription machinery [BR:
csv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101206167
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
101206167
NCBI-ProteinID:
XP_004148429
UniProt:
A0A0A0LLW1
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Position
2:20147294..20151580
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AA seq
560 aa
AA seq
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MMGTSFRPNLRWGFQIQTHSLKNSPSKLSPHASKGREAAFNSGRLSFFSSICEEGESIPR
ETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSL
PTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSF
HDSSGLPIEGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKIASRLLTTRA
VKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIASM
SCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALG
VLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTKAINQIQKARKVLN
HSGRRYSDDDIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMKYMEFTADMSIQSPE
ETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLLHISKEWVRKIEK
KAMTKLKNEETVKHLSHYLD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaacaagttttaggccaaatctcaggtggggttttcaaattcagactcattcc
ctcaagaattccccttccaagctttccccacatgcctctaaaggcagggaagccgccttt
aattcaggaagactttccttcttctccagtatttgtgaagaaggagaatctatccctaga
gaaaccttgaaaacatacacttgcttgtctgaagctccacaaacctcggccaatgatctg
ttaaatttggaagagatcgagatgaacagtggggcaaagtcacttggtcctatgcattat
gggattaaaagtaccaggccatctaaggtagaggacaatttttcttcctgtacgagcttg
cctactggcaaggcgtcaccttttggcatcttaatggaaaaccttgatgttttggaggaa
acttttactgaatcaggcatgctcagcttggaaagagatattgtgctgcaactaacaaaa
cttggagctttggagttttttaatacctgtctatctaggactcttaaaacttcaagtttt
catgattcgtcaggcttacccattgagggcggtgaagatcacaatgtaaaccagaaaacc
aatgaccagaatgacaatgtcacagtttactctgcaaaaaaagcaggaagaagatcagta
aaaaagagagcaatggataatgctgataaaattgcttcccggctgctgactacaagagct
gttaaagaaaaaatccatagatcgactgtattttcgagaaaaaaatcatctaattcaagt
aaaagaagactgattgttgcaataaatgaagctgaaatgtccacaggggttaaggtagtt
gcaaatttagaaagaattagagaaaccttagaaaaggaatctggaagaatagcaagcatg
agttgttgggctgaagctgccagtgttgatataaaggacctgcagaaacagttacaattt
ggttcgttctgccgggatgagcttttaaggagcactaattcattagtcgtgttcctggca
aagaaataccgatgctctgggttaccaatggaggacttggttcaggcaggagcccttggt
gtgctgcaaggtgttgaaaggtttgaccctaaaaggggttttagaatctcaacatatatt
caatactggataaggaaatcaatgtcaagagttgtggcacggaattcaaggggaattcaa
attccaaggtcattaaccaaggcaataaatcagatacaaaaagcacgaaaagtgttgaac
cacagtggtaggagatattcggatgacgatatagcaagggctactggacttcctttagcc
aaggttagagttgccagcaactgtttaaaagttgtgggttcgaatgatcagaagatgggt
gatggagtaaatatgaaatatatggaatttacagctgatatgtcaatacagagcccagaa
gagactgtgaagcgaaaactaatgaagaaagacatctttaatattcttcaaaggttggaa
tcaagggagaggcaggtcctggtgctgcgttacggacttgtggattttgaacccaagtca
ctcgaggaaattggaaaacttctgcacataagcaaggaatgggttcgaaaaatagaaaag
aaagctatgacaaagctgaagaatgaagagactgtgaagcacttgagccattacttggat
tga
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