Cucumis sativus (cucumber): 101206210
Help
Entry
101206210 CDS
T02486
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101206210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101206210
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101206210
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101206210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
101206210
NCBI-ProteinID:
XP_004141143
LinkDB
All DBs
Position
3:complement(35154398..35180485)
Genome browser
AA seq
900 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNSNQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALLDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVSELESQIDNFEAEIEGLSVKKGKARPPRLVHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVDELYSSLPLDKVES
LEDLVAICPPSLVKGTPTLNVKTTLATSATQAPVTAAPSHQQTTGLPDQVDDSTLPDGNI
DILLKTPPSKNSVLGSSAATTPTGNQAASSSLNGAVHGSGISATSSILPGSSAVRAVLET
TAAPNSSPVNMPTSAKDEEIASFPGRKLSPSESGLVRGGMGRGVIANQPPSTSSHTSGIV
VPSNITLGNVSSASEVTKRNIMGVEERAGSGIVQSVVSPLSNRLALPTTAKVSDGTTMVD
PTSVSDAAAIGGRVFSPTVVSSMQWRPGSSFQNPNEGGQFRGRAEIAPDQREKFLQRLQQ
VQQQGHSTLLGMTLGGGNHKQFSSQQQSSLLQQFNSQNSSVSSQAGLGIGVQAPGVNPVA
VTSGSLQQQPNSFQQSNQQALTTSGAKDSDVVHSKVEEEQQQQQQQSLLEDTTDSAAVSV
LGKNLMSDDDLKGSYTVDTPVGITASLTETASVTREDDLSPGQPLQPGQPSGGLGVIGRR
SVSDLGAIGDNLGGSSMTTGGMHDQFYNLQMLEAAFYKLPQPKDSERPRSYTPRHPAITP
PSYPQVQAPIINNPALWDRLGLETYGTDTLFFAFYYQPNTYQQYLAARELKKQSWRYHRK
YQTWFQRHEEPKVATDEYEQGTYVYFDFHVNNDDLQHGWCQRIKTEFTFEYNYLEDELNI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagtcgaaagctccaaggggaaattgaccgagttctcaagaaggtccaagaa
ggggttgacgtttttgacagcatttggaacaaggtttatgataccgacaattccaatcag
aaggagaaatttgaggcggacttgaagaaggagataaagaagcttcagagatatagggac
caaatcaagacatggattcagtccagtgagattaaggataagaaggtcagtgcgtcttac
gagcaggctttgttggatgctcgtaaacttattgagcgtgaaatggaaagattcaagatt
tgtgaaaaggagacaaaaactaaagccttctcgaaagaaggtttgggtcaacagcctaaa
actgatccaaaggagaaagctaaatcagagacacgggattggttgaacaatgtggttagt
gagttggaatctcagattgataattttgaagctgagatcgagggtttgtctgtaaagaag
gggaaagcaaggccacctagattggttcatcttgaaacatctattacccggcacaaggct
catataatgaagctggaactgatcttgagactgcttgataacgatgaattgagtcctgag
caagtcaacgatgtcaaggacttcttagaagattatgttgaaagaaatcaggaggatttt
gatgaattcagtgatgtggatgagctttacagctcattgcctcttgataaggtggaatct
cttgaagatttggttgcaatttgtcctcctagccttgtgaagggtacaccaactctcaac
gtaaagactacactggcaacttcagcaactcaggctcctgttactgctgctccaagtcat
caacaaacgactggccttccagatcaggttgatgattcaactttgccagatggtaacatt
gacattcttttgaagactccaccttctaagaatagtgtccttggatcgtctgcggctaca
acacccactgggaaccaggcagcctcgtcttccttgaatggtgcagtgcatggatctggc
atatccgctacatcatccattcttccaggttcaagtgctgttcgtgcagtattggagact
acggctgctcctaattcatctcctgtaaatatgcccacttctgcaaaggatgaagaaatt
gctagcttcccaggccgtaaactgtctccatcagaatccggacttgttaggggtggcatg
ggaagaggtgtgattgctaatcagccaccctccacttcctcccatacttctggtattgtg
gttcctagcaatataactctcggtaacgtttcttctgcctctgaagtgacaaagagaaac
attatgggagttgaagaacgggctggtagtggcattgttcagtccgtagtttccccttta
agtaacagacttgctttgcctacaacagctaaagttagtgatggaacgaccatggttgat
cctacttctgtaagtgatgcagcggctatagggggtcgagttttctctccaactgtggtt
tctagcatgcagtggagaccaggaagttctttccaaaatccgaatgaaggagggcagttt
cgtggaagagctgaaatagcaccagatcagagggagaagttcttgcagcgtctacagcaa
gttcagcaacagggccatagtacacttcttggcatgactcttggtggaggaaatcataag
cagttttcttcacaacagcaaagttcacttctacagcagtttaattcccaaaattcatct
gttagttctcaagctggtctgggaattggagttcaggcacctggagtaaatcctgttgct
gttacatctggttcattacagcagcaaccaaattccttccagcagtctaatcagcaggca
ttaacgacaagtggagcaaaagattcggatgttgtccattcaaaagttgaggaggagcag
cagcaacaacagcagcaaagtttattggaggatactactgattctgctgctgtttctgtc
cttggaaagaatctgatgagcgatgatgatttgaaaggatcatatacagttgatactcca
gttggcataactgcttcactgactgagacagcttcagtaacgagagaagatgacctttct
cctggtcaacctttgcagcctggccaaccttctggaggtcttggtgtcattggccgaaga
agtgtttctgacttgggtgccattggtgataaccttggcgggtcctcgatgactactgga
ggaatgcacgaccaattctataatttgcaaatgcttgaagctgcattctacaagctacct
caaccgaaggactcagagcgtccaaggagctatactccaaggcaccctgcaattactcct
ccgagctatcctcaagtacaggcccctattattaataatcctgccttatgggaccgatta
ggtctagagacctacggcactgacacattgttttttgcattttactatcaaccgaacacc
tatcaacaatacttggctgctagagaattaaagaaacaatcttggagataccacagaaaa
tatcagacatggtttcaacgacatgaagagccaaaagttgctacagatgagtatgagcaa
ggaacttacgtgtacttcgatttccatgttaataatgatgacctacaacatggatggtgc
caaaggattaaaactgaattcacttttgagtataactaccttgaagatgaactcaatata
tag
DBGET
integrated database retrieval system
