Cucumis sativus (cucumber): 101206276
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Entry
101206276 CDS
T02486
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101206276
Membrane trafficking [BR:
csv04131
]
Protein recycling
Others
EARP complex
101206276
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101206276
NCBI-ProteinID:
XP_011654226
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All DBs
Position
1:complement(9909972..9952022)
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AA seq
1093 aa
AA seq
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MQPNLFPFGSALGNPLAFDGDLSEGFETPRFLFFVPFLLLQGGGMDLSKVGEKILSSVRS
ARSLGLLPTTSDRPEVPARAVAAAAVARALAGLPPHQRFSLSSSSEELSSIYGSRNHGHE
VEELEEVFYEEEFDPVRHVLEHVPSEENDLEYLEKQATKRLAQLDKVAERLSRHVMEHHE
VMVKGMHLVRELEKDLKIANVICRNGKRHLNSSMLEVSRDLIVNSNSKKKQALLDMLPVL
SELRHAVDMQSMLEVLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEIWLGRTL
QKLDSLLIEVCQEFKEEAYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHSALKDVVQ
QDQDVHIQNSRLTYSDLCFRIPESKFRLCLLKTLAVLFTLMCSYYQILSFQLDTKDSIEQ
TPSMKHQEDKYDVKLGDSEESTINVSSMGAAGITNSIYMDEGDFNRESRTDSSAASTSGS
PWYHLRKDGIHFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDLNVFT
LAGEAFCGVEAVEFRQKLKIVCENYYVGFHKQSMHALKMVMEKENWLTLPPDTVQVVSFA
GLVGDGAPLFVTSEGNSSNGKVPRSDKSTSSISTGMDRSGFLQWLKSGNPFLLKLMHTYK
EGTPNGTHYGEVDGSVGGSSHRSNVSPTKFTDNLSNGANTVSEDEDEDLLADFIDEDSQL
PSRISKPKLSRNHCSNHSSDHITAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGMCQL
FEVFFYFVYETFGQLSTTSGGKGFPDSLNYKLKTALSRAAQDCEQWIRPHSSSPSASSST
FSFNEVTPSPPGSSLGYLHGTSFGLKERSAGADSLSLVARIMHRSKAHIQSMLLQTNVAV
IEDFYANLLDAVPYLIEHIHKNTARLLLHVSGYVDRIANAKWEVKELGLEHNGYVDLLLG
EFKHYKTRLAHSGVRKEVQDLLLEYGLDIVAETLIEGISRIKRCSDEGRALMSLDFQVLI
NGLQHFVSANVKPKLQMVETFIKAYYLPETEYVHWARSHPEYSKSQVIGLVNMVASMKGW
KRKTRLEILEKIE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaacctgtttccatttggcagtgctctcggaaaccctttggcgttcgatggt
gatttgagcgaaggattcgagactcccaggtttctcttctttgttccctttttattgctg
caaggaggtggaatggacttgtccaaggttggggagaagattttgagctccgtcaggtca
gctagatcgcttggacttcttcctaccacttctgatcgaccggaggttccggcacgtgct
gtggctgcagcagctgtcgcccgtgcgcttgcgggattgcctccgcaccagagatttagt
ctctcatctagctcggaagaactgagctcaatatatggcagtagaaatcatggccacgaa
gtagaggaactagaggaagttttctatgaagaggaatttgacccggttaggcatgtatta
gagcatgttccatcagaagaaaatgatctcgaatatttggagaaacaggctactaagaga
ttagctcaacttgataaagtggctgaacgtttatctcgccatgtaatggagcatcatgaa
gtgatggtgaaggggatgcatttggtcagggagttggagaaagatttgaaaattgcgaat
gtcatctgcaggaatgggaagagacacctaaattcgtcaatgcttgaagtgtccagagat
cttattgtaaactctaactccaagaagaaacaagcacttctggatatgcttccagttttg
agtgagcttcgtcatgctgtggacatgcaatcaatgcttgaggtccttgttgaagaggga
aattattataaggcttttcaggtcttatctgagtatttgcagctattagatagtttttca
gagctttcagtaattcaagagatgagtcgtggtgttgagatttggcttggaagaaccctg
caaaagttggattcgcttttgatagaagtctgccaggagttcaaggaggaggcatattta
accgtggttgatgcctatgctctaataggggatgtctctggtcttgccgaaaagatacaa
agcttctttatgcaggaagttatatcagaaacccattctgccttgaaagacgttgtgcaa
caggatcaggatgtacatatacagaatagtaggcttacatacagtgatctatgctttcgg
atacctgaatcgaagtttaggctatgtttactaaaaacgctagctgtcttatttactttg
atgtgctcatattatcaaatcttgagcttccaactggataccaaggattcaattgaacaa
actcctagcatgaagcatcaagaagataaatatgacgttaagttaggagattctgaggaa
tcaacaatcaatgtctcttcaatgggggcagcaggaattacaaattctatttacatggat
gagggtgatttcaatagggagtcccggacagacagcagtgcagcatcaaccagtggttct
ccctggtatcatctgagaaaagatggcatacattttgtttcccaaaccctacaaagaggc
cgtaagaacctttggcaactaactactagtcgtgtgtcagtacttctttcttctgctgct
gtttgttcgacgagcattcatcaattcttgaaaaactacgaagatctcaatgtcttcaca
ttggctggagaagccttctgtggagttgaagcagttgaatttaggcaaaagttaaagatt
gtatgtgaaaactattatgttggtttccataagcagagtatgcacgctctaaagatggtt
atggaaaaagagaattggcttacactgccaccagatacagttcaagttgttagttttgct
ggacttgttggtgatggggcacctttgtttgttacatctgagggtaactcgtctaatggc
aaggtcccacgttcagataagtcaacaagctcaatcagtacaggcatggatagaagtggt
tttttgcagtggctcaaaagtggaaatccatttttacttaaactaatgcatacttataag
gaaggcacaccaaatggtacccattatggagaagtggatggaagtgtaggtggaagttct
catagaagtaatgtctctccaactaagtttacagataatctttcaaatggtgctaatact
gtttctgaagatgaagatgaagatcttttagctgactttattgatgaagatagtcaactt
ccaagcagaatttcgaaacccaaactttcacggaaccactgttctaaccatagtagtgat
catattacagcacaaacaggatcatctctatgccttctaaggtccatggacaaatatgca
aggcttatgcagaaactagaaatagtgaatgttgagtttttcaagggaatgtgccagttg
tttgaagtgttcttctattttgtatatgagacttttggccagcttagcaccacttccggt
ggaaaaggctttccggactccctcaattataagttgaagacagctttgtcacgagctgca
caggattgtgagcagtggataagaccccattcatcttccccatcagcttcaagttcaaca
ttttctttcaacgaagttacaccaagccctcctggcagtagcttaggttacttgcatgga
acatcttttggtctcaaggaaaggagtgcaggtgctgactcattatcacttgtggcaaga
ataatgcataggtctaaagctcatattcagtccatgcttctgcaaactaatgtagctgta
attgaagacttctatgcaaatctgttggatgccgtcccatatctcatcgagcacattcat
aaaaatactgcaagactgcttcttcatgtcagcggttatgttgatcggatagccaatgca
aaatgggaagtaaaagagcttggactagagcataatgggtatgttgacttgctattggga
gaattcaagcattataaaacaaggctggctcatagtggagttcgtaaggaggtacaagac
cttctcttggagtatggactggatattgttgcagaaactcttattgaaggtatatcacga
ataaagagatgttcagatgaaggacgtgctctcatgtcattggattttcaggtgttaatc
aatggcttgcaacattttgtttcagcgaacgtgaagcctaagttacaaatggtcgagacc
ttcattaaggcgtactacctcccagaaactgaatatgtacactgggcacgctctcacccg
gagtacagtaagagccaagttattggtttggttaacatggttgcatcgatgaaagggtgg
aagaggaaaactcggttggaaatattggagaagatcgagtga
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