Cucumis sativus (cucumber): 101206425
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Entry
101206425 CDS
T02486
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 2
KO
K14485
transport inhibitor response 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101206425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101206425
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
101206425
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
101206425
NCBI-ProteinID:
XP_004134961
UniProt:
A0A0A0KN74
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Position
6:complement(29004652..29009556)
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AA seq
584 aa
AA seq
DB search
MSSKRRKGSGDSDESNRAGSIFPDEVLERVLSLVKSHRDRSSVSLVCKDWFNAERWSRTH
VFIGNCYSVSPEIVIRRFPNIRSVTLKGKPRFSDFNLVPSDWGADIHSWLVAFASKYPIL
EELRLKRMTVMDESLEFLSRSFPNFKALSMMSCDGFSTDGLAAIATNCKNLTELDILEND
INDKSGNWLSCFPDTLKSLEVLNFASLNSDVSFEALEKLVRRSKSLKVLKVNRNINLEQL
QRLLVHTPQLTELGTGSFSQEITLRQYCDLEEAFKSCKNLHTLSGLLESTVLYLQVLFPA
CANITFLNLSYAILHGGELAGLLSHCPVLRRLWVLDTVEDKGLKAVGLSCPLLEELRVFP
AHPFADNLVHGVTESGFLAVSYGCRKLCYVLYFCHQMTNEAVATIVQNCPDFTHFRLCIM
NPHQPDYLTKQPMDEAFGAVVKTCSKLRRLAISGLLTDLTFEYIGKYAKNLETLSVAFAG
RTDWGMQCVMSGCPKLKKLEIRDSPFGNAALLSGLERYESMRSLWMSACKVTMNGCRVLA
KQVPRLNVEVIKDDGNDECEAESVYVYRSVAGPRRDAPPFVLTL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagaggaggaaagggtcaggtgactcggatgagtcgaatcgggctggttca
attttcccagatgaggtattggaaagagttttgagtttggtgaaatctcacagagataga
agctctgtgtctttggtttgtaaagattggttcaacgctgagcggtggtctcgaactcat
gttttcattggaaactgttactctgtttcgccggaaattgtaatccgacggttcccgaac
attcggagtgtgacactgaaagggaaacctaggttttcggatttcaatttggtaccttca
gattggggagctgatattcattcatggcttgttgcttttgcttcaaaatacccaattctt
gaagaattgaggctcaagagaatgactgtaatggacgaaagcttggagtttttgagtcgt
tccttcccaaatttcaaagccctttcaatgatgagctgcgatggcttcagcaccgatggc
cttgccgccattgccactaactgcaagaacttgactgagcttgacatacttgagaatgac
attaatgacaaaagtggaaattggctgagttgcttcccagatactttgaaatctctggaa
gtacttaactttgcaagtttgaatagtgatgttagttttgaggcccttgagaagctggta
agaaggtccaaatcgctgaaggttttgaaggtcaataggaatataaacttggaacaattg
cagaggctgcttgttcacactcctcagctaacggagttaggcacgggctctttttcgcaa
gagatcactctccggcagtattgtgaccttgaagaggcttttaaaagttgcaagaatctg
cacactctctctggtttgttagagtcgacagtgttgtatctccaagttctttttcctgcc
tgtgcaaatataactttcttgaatcttagctatgctattctacacggtggtgaacttgct
ggactcctttcccactgccccgttcttcgccgtctttgggttttagacacagttgaagac
aagggactgaaggccgttggactgagttgccccttgcttgaggaactccgtgtatttcca
gcacatccatttgcggacaatttagtccatggtgtaactgagtcggggtttcttgcagtc
tcttatggctgtcgtaaactctgttacgttctctacttttgccatcagatgacgaatgag
gctgtggccaccattgtgcagaactgcccagatttcacccattttcgtctctgcattatg
aaccctcaccaaccagactatcttacaaagcaaccaatggatgaggcctttggtgcggtg
gtgaaaacttgttctaagctgcgtagactcgccatttcaggcttgttaacagacttaaca
tttgaatacatcgggaaatatgcaaaaaacttggaaactctttcagtggcttttgctgga
agaactgactggggaatgcagtgtgttatgagtggttgtccaaagctgaaaaagctggag
atcagagacagcccatttggaaatgcagctttgctttctggtttggagaggtacgaatcc
atgagatcactatggatgtcagcctgcaaggtgacgatgaacgggtgtcgagttttggcg
aagcaggtgcctcggttgaatgttgaggtcattaaggatgatggaaatgacgagtgtgag
gctgaaagtgtttatgtataccgctctgttgcaggtccacgtagagacgccccacctttt
gttctcaccctctaa
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