Cucumis sativus (cucumber): 101206514
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Entry
101206514 CDS
T02486
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101206514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101206514
03036 Chromosome and associated proteins [BR:
csv03036
]
101206514
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101206514
Coactivators
SAGA/TFTC/STAGA complex
101206514
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101206514
STAGA complex
101206514
TFTC complex
101206514
SAGA complex
101206514
SLIK complex
101206514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
101206514
NCBI-ProteinID:
XP_004140111
UniProt:
A0A0A0KEI5
LinkDB
All DBs
Position
6:complement(21243754..21255311)
Genome browser
AA seq
543 aa
AA seq
DB search
MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTAND
VDGALNLRNVEPMYGFASGGPLRFKRAIGHRDLFYLEDKDLEFKDIIDAPLPKAPFDTAV
FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK
ITELVVSRSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW
SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY
NTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEML
LANQKNEMKRHEAWRVYGALLRAVGQCIYDHVKIFPPLPSMPAGSILRTNARVITTTFLN
KRKENADHLEGQPPLKKMVMDSPMGVMPTNSSASHMEGAVNPASSSNSSLILPTSSQPLQ
NETIPGSNSRKGKYDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAPELS
MFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtattatacctaaagaaaatattgaggtcattgcgcaatgtattgggatcaataac
ttgtcctcagatgttgctttggatattgctcccgatgttgaatatcgtctgcgggagatc
atgcaggaggccatcaaatgcatgcgtcactcaaagagaactacgttgacagcgaatgat
gttgatggtgcactgaacctaagaaatgttgagccaatgtatggttttgcttctggaggt
cccttgcgatttaaaagagccattggacatcgggatctgttttaccttgaagacaaggat
ctggaatttaaagacatcattgatgctccactgccaaaagctccttttgatacagcagtg
ttttgccattggctagcaatcgaaggtgtacagcctgcaatacctgaaaatgctcctgta
gaagtaattttacctccttctgatgccaaaagtaatgaacaaatgggtgggctgcctgtt
gacattaaattgccagttaagcatattctgtccaaggagctacagctatattttgacaaa
atcacggagcttgttgttagtaggtcaagctcaattctatttaagaaggcactagtgagt
ttagctacggactcaggacttcacccattggttccttattttacatgctttatagctgac
gaggttgcacgtggacttggtgattattcccttctttttgctttaatgcgtgttgtctgg
agtcttcttcagaatcctcacatccacatagaaccttatctacaccaaatgatgccatct
gttgtaacctgcctagttgcaaaaaggttggggaataggttttcagacaaccactgggaa
cttagagacttcacggcaaaagtggttgctttaatctgtaaaaggtttggtcatgtttac
aacactcttcagacaaagctcacaaaaactcttctcaatgcatttttagaccccaaacgg
gctttgactcaacattatggtgcaattcaaggattagcagccttggggatgaatgtggtt
cacctccttatacttccaaatcttgagccatatctggggcttttggaacctgaaatgctt
cttgctaatcaaaagaatgagatgaagcggcatgaagcctggcgcgtttatggagccttg
ctgcgtgcggttggtcaatgcatttatgatcatgtcaagatttttcctcctttgcctagt
atgcctgcgggttctatcttgcggacgaatgcgagagttatcaccaccacatttctgaac
aaacgcaaggaaaatgccgaccacttagaagggcagcctccccttaagaagatggtaatg
gatagtccaatgggtgtcatgccaactaattcatctgcatcacacatggaaggagcagtt
aatcccgcttcttccagcaattccagtctgattttgccgacatcttctcaaccattgcaa
aacgaaaccattccaggcagcaatagtaggaaaggcaagtatgatgatcaaattcttaaa
aggtcagctgtcttatctcaagtctggaaggaggatcttaaatctggaaagttgttaaca
tccatgttagatttgtttggtgaaagtatgttatgcttcattcctgctcctgaattgtcc
atgttcttgtaa
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