Cucumis sativus (cucumber): 101206646
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Entry
101206646 CDS
T02486
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101206646
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101206646
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
101206646
NCBI-ProteinID:
XP_031745066
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Position
7:complement(9182132..9184490)
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AA seq
400 aa
AA seq
DB search
MAMALHTIASFLFFLTLTVLMLFNNLAAFATPLTFNVLDFGTKPNNAETDSSKALQLAWM
HACSSSKPATIYVPKAKFYVRSATFNGPCKNNDITIRIDGTLVAPSDFRLTSNSENWILF
HNVNGVTVIGGIIDGQGTQLWACKNSANTCPSGTTSLEFTNSQNILVNGLTSLNSQIFHI
VVNQCRNVKMQGLKVFAASNSPNTDGIHVGDSSHVTILNSNIRTGDDCISIGPGSSNLWI
ENVVCGPGHGISIGSLGKELKEKGVQNVTVKSCKFMDTQNGVRIKSWGRQSSGFAKDIRF
QHLTMTNVQNPIIIDQNYCPHNQGCPGQSSGVTVSDVKYKNIHGTSATPVAIKFDCSPKF
PCKGIKLEDVKLSYKNQVAKASCSNAQGFDVGLVQPMGCF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggctcttcatacaattgcttcatttcttttcttcttaacactaactgtcctt
atgttgttcaataatttagctgcctttgccactcccttaacattcaacgttctggatttt
ggaaccaaacccaataacgcagaaaccgactcctccaaggccttacaattggcatggatg
cacgcttgtagctcttctaaaccagctaccatttatgtgcctaaggccaaattttatgtt
cgtagtgcaactttcaatggcccttgcaaaaataatgacattactatacgtattgacggc
actctagtggctccttcagattttcgtctcacttccaattctgaaaattggatacttttt
cacaacgttaatggagtcactgtcataggtggtattattgatggtcaaggaactcagctt
tgggcttgcaaaaattctgccaatacttgtccttctggaaccacgtcactggaatttacc
aattcacaaaacatattggtgaatggattaacttcactgaatagtcagatatttcacata
gttgtaaatcaatgccgtaatgtaaaaatgcaagggctaaaggtcttcgccgctagcaac
agtccgaacactgatggaattcatgtaggagattcatctcatgtcaccatcctcaactct
aatatccgcactggtgatgactgcatttccataggccctggaagttccaacttatggatc
gagaatgttgtttgtggacctggccatggaattagcattggaagtttggggaaagagtta
aaagagaagggggttcagaatgtgacagtaaaatcatgcaaatttatggatactcaaaat
ggagtgagaataaaaagttggggaagacaaagcagtgggtttgcaaaagatattcgtttt
caacatctcacaatgactaatgttcagaatcctataattattgatcaaaattattgtccc
cataatcaaggttgtcctggacagagctctggagttacagttagcgacgtgaaatacaaa
aacattcacgggacatctgccacaccggtggccatcaaattcgattgtagcccaaaattt
ccatgcaaaggaataaagctggaggatgtgaagctaagttacaagaatcaagtagccaaa
gcttcatgtagtaatgctcaaggatttgatgttggcctggttcagcccatgggttgcttt
tag
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